KEGG   Kytococcus sedentarius: Ksed_13020
Entry
Ksed_13020        CDS       T00974                                 
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
kse  Kytococcus sedentarius
Pathway
kse03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:kse00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Ksed_13020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kse03400]
    Ksed_13020
DNA repair and recombination proteins [BR:kse03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Ksed_13020
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Ksed_13020
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII DEAD UVR AAA_22 AAA_16 UB2H AAA_5 DUF6716 DUF87 Helicase_RecD E3_UFM1_ligase UvrD-helicase AAA_7 nSTAND3
Other DBs
NCBI-ProteinID: ACV06333
UniProt: C7NHH6
Position
1346436..1348553
AA seq 705 aa
MRPVTDLQRSVAPFEVVSEYDPAGDQPTAIAELTRRIEAGEQDVVLLGATGTGKSATTAW
MIEKLQRPTLVMAPNKTLAAQLANEFRELLPNNAVEYFVSYYDYYQPEAYVPQSDTYIEK
DSSINEEVERLRHSATNSLLTRRDVVVVASVSCIYGLGTPQEYVDRMVRLHVGQEMDREE
LLRKFVTMQYTRNDMAFQRGTFRVRGDTVEIIPMYEELAVRIEFFGDEIEAVATLNPLTG
EVVRDEQEMYIFPATHYVAGPERMEKAISRIETELEQQLERFEQQGKLLEAQRLRMRTTY
DVEMMREMGSCNGIENYSLHIDGREPGSAPNCLLDYFPEDFLLVLDESHVTVPQIGAMFE
GDMSRKRTLVDHGFRLPSAMDNRPLKWEEFLERIGQTVYLSATPGDYELAKSDGYVEQII
RPTGLVDPEIVVKPTQGQIDDLLAEIRERAERNERVLVTTLTKKMAEDLTDYLLERQVRV
RYLHSEVDTLRRIELLKELRLGEYDVLVGINLLREGLDLPEVSLVSILDADKQGFLRSNR
SLIQTIGRAARNVSGQVHMYADKVTESMQYAIDETNRRRAVQIAHNTEHGIDPTPLRKKI
GDITEMLVEMQGLAGTWEGAEDPGRPTGRRGRAEAQDADVAADLAVATGDRPTDMPRAEL
AQLIQQLSDQMHTAASQLQFELAGRLRDEIADLRKELRQMERAGG
NT seq 2118 nt   +upstreamnt  +downstreamnt
atgcgccccgtcaccgacctccaacgcagcgtcgctcccttcgaggtggtctccgagtac
gaccccgccggggaccagccgaccgcgatcgccgagctgacccgccgcatcgaggcgggg
gagcaggacgtcgtcctgctgggcgcgaccggtaccggcaagtcggcgaccacggcatgg
atgatcgagaagctgcagcggcccaccctcgtgatggcccccaacaagacgttggccgcc
cagctggccaacgagttccgcgagctgctgccgaacaacgcggtcgagtacttcgtttcg
tactacgactactaccaacccgaggcgtacgtcccccagtcggacacctacatcgagaag
gactcctccatcaacgaggaggtcgagcggctgcggcacagtgccacgaactcgctgctc
acccgacgggacgtggtcgtggtggcgtcggtgtcctgcatctacggcctgggcaccccg
caggagtacgtcgaccgcatggtgcgcctgcacgtggggcaggagatggaccgcgaggag
ctcctgcgcaagttcgtcacgatgcagtacacccgcaacgacatggccttccagcggggc
accttcagagtccggggcgacacggtcgagatcatcccgatgtacgaggagctcgcggtg
cgcatcgagttcttcggcgacgagatcgaggcggtcgccaccctgaacccgctcaccggg
gaggtcgtgcgcgacgagcaggagatgtacatcttcccggccacccactacgtcgccggg
ccggagcgcatggagaaggcgatctcccgcatcgagaccgagctcgagcagcagctcgag
cgcttcgagcagcagggcaagctgctggaggcccagcggctgcgcatgcgcaccacctac
gacgtcgagatgatgcgggagatgggctcgtgcaacggcatcgagaactactcgctgcac
atcgacggacgcgagcccggctcggcgcccaactgcctgctcgactacttccccgaggac
ttcctgctggtgctcgacgagtcccacgtgacggtcccgcagatcggcgccatgttcgag
ggcgacatgtcacgcaagcggaccctggtggaccacggcttccgcctgcccagcgccatg
gacaaccggccgttgaagtgggaggagttcctcgagcgcatcggccagaccgtgtacctg
tcggccacgccgggggactacgagctggcgaagtcggacggctacgtggagcagatcatc
cggcccaccggcctggtggacccggagatcgtcgtcaagcccacgcagggccagatcgac
gacctgctggccgagatccgcgagcgggccgagcgcaacgagcgggtcctggtcaccacg
ctcaccaagaagatggccgaggacctcaccgactacctgctggagcggcaggtgcgcgtg
cgctacctgcacagcgaggtcgacaccctgcgccgcatcgagctgctcaaggagctgcgg
ctgggggaatacgacgttctggtgggcatcaacctgctgcgcgagggcctggacctgccc
gaggtgtcgctcgtgagcatcttggacgcggacaagcagggcttcctgcgttccaaccgg
tccctcatccagaccatcggccgcgcggcccgcaacgtctccggccaggtgcacatgtac
gcggacaaggtcaccgagtccatgcagtacgccatcgacgagaccaaccgccggcgggcg
gttcagatcgcgcacaacaccgagcacggcatcgacccgaccccgctgcgcaagaagatc
ggcgacatcaccgagatgctcgtggagatgcagggcctggccgggacctgggagggcgcc
gaggaccccggacgcccgacgggacgccgggggagggccgaggcccaggacgccgacgtc
gccgccgacctggcggtggccacgggcgaccgcccgaccgacatgcccagggcggagctc
gcccagctcatccagcagctctcggaccagatgcacacggcggccagccagctgcagttc
gagctcgccgggcgcctgcgggacgagatcgccgacctgcgcaaggaactgcggcagatg
gagcgcgccggagggtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (29)   

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