KEGG   Kitasatospora setae: KSE_13850
Entry
KSE_13850         CDS       T01648                                 
Symbol
rpoZ
Name
(GenBank) putative DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
ksk  Kitasatospora setae
Pathway
ksk03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ksk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    KSE_13850 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ksk03021]
    KSE_13850 (rpoZ)
   03400 DNA repair and recombination proteins [BR:ksk03400]
    KSE_13850 (rpoZ)
Enzymes [BR:ksk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     KSE_13850 (rpoZ)
Transcription machinery [BR:ksk03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     KSE_13850 (rpoZ)
DNA repair and recombination proteins [BR:ksk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      KSE_13850 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: BAJ27213
NITE: KSE_13850
UniProt: E4N7N2
Position
complement(1539488..1539742)
AA seq 84 aa
MTAPEGIINPPIDELLEATDSKYSLVIYAAKRARQINAYYSQLGEGLLEYVGPLVDTHVH
EKPLSIALREINAGLLTAEAVEGV
NT seq 255 nt   +upstreamnt  +downstreamnt
atgaccgcgcccgagggcatcatcaacccgccgatcgacgagctgctcgaggccaccgac
tccaagtacagcctggtgatctacgcggccaagcgcgcccgccagatcaacgcgtactac
tcgcagctgggcgagggcctgctggagtacgtcggcccgctggtcgacacccacgtgcac
gagaagccgctgtcgatcgcgctgcgcgagatcaacgccggcctgctcaccgccgaggcg
gtcgagggcgtctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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