KEGG   Kitasatospora setae: KSE_28800
Entry
KSE_28800         CDS       T01648                                 
Symbol
hup1
Name
(GenBank) putative DNA-binding protein Hu
  KO
K03530  DNA-binding protein HU-beta
Organism
ksk  Kitasatospora setae
Brite
KEGG Orthology (KO) [BR:ksk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ksk03032]
    KSE_28800 (hup1)
   03036 Chromosome and associated proteins [BR:ksk03036]
    KSE_28800 (hup1)
   03400 DNA repair and recombination proteins [BR:ksk03400]
    KSE_28800 (hup1)
DNA replication proteins [BR:ksk03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    KSE_28800 (hup1)
Chromosome and associated proteins [BR:ksk03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    KSE_28800 (hup1)
DNA repair and recombination proteins [BR:ksk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      KSE_28800 (hup1)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: BAJ28691
NITE: KSE_28800
UniProt: E4NBW0
Position
complement(3226212..3226493)
AA seq 93 aa
MNRSELVAALAERAEVTRKDADAVLAAFAEITGEVVAKGDEKVTIPGFLTFERTLRAART
ARNPQTGEPIQIAEGFSVKVSAGSKLKEAAKGK
NT seq 282 nt   +upstreamnt  +downstreamnt
atgaaccgcagtgagctggtggccgcgctggccgagcgcgccgaggtgacccgcaaggac
gccgacgccgtgctggccgccttcgccgagatcaccggcgaggtcgtcgccaagggcgac
gagaaggtcaccatccccggtttcctgaccttcgagcgcaccctgcgcgccgcccgcacc
gcccgcaacccgcagaccggcgagccgatccagatcgccgagggcttcagcgtcaaggtg
agcgccggctcgaagctgaaggaagccgcgaagggcaagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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