KEGG   Klebsiella variicola At-22: Kvar_1868
Entry
Kvar_1868         CDS       T01170                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
kva  Klebsiella variicola At-22
Brite
KEGG Orthology (KO) [BR:kva00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:kva03016]
    Kvar_1868
Enzymes [BR:kva01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     Kvar_1868
Transfer RNA biogenesis [BR:kva03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Kvar_1868
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNAseD_HRDC_C HRDC
Other DBs
NCBI-ProteinID: ADC57769
Position
1986327..1987442
AA seq 371 aa
MITTDDGLRAVCEAASAASAVALDTEFVRTRTYYPQLGLLQLFDGTQVSLIDPLTISDWA
PMRELLLNQDVTKYLHAGSEDLEVFLNAFSLMPQPLIDTQILAAFCGRPMSWGFASMVEE
YSGVALDKSESRTDWLARPLTERQCEYAAADVWYLLPIASQLMAETDRAGWLSAALDECR
LMQQRRQEVVDPAEAWRDIGNAWQLRTRQLGCLQLLAEWRLRKARERDLAVNFVVREEHL
WSVARYMPTSLGELDSLGLSGSEIRFHGKTLINLVEKAQALPESALPAPLQNLIDMPGYR
KAFKDIKALVQEVSADKGVSAELLASRRQINQLLNWHWQLKTQAGEPELISGWRGELMAG
RLKSLLNDYPR
NT seq 1116 nt   +upstreamnt  +downstreamnt
atgatcaccaccgacgatggcctgcgcgctgtctgcgaagcggcaagcgcggcctccgcc
gtcgctctggatacggaatttgtccgtacccgtacctactatccgcagctgggcctgctg
cagctgttcgacggcacccaggtctctctgatcgatcccttgacgattagcgactgggcg
ccgatgcgcgagctgctgctcaaccaggatgtgactaaatacctgcatgccggcagcgaa
gatttagaagtcttcctcaatgcgttcagcctgatgccgcagccgctgatcgacacccag
atcctggcggcgttctgcggccgcccgatgtcctggggctttgcctctatggtggaagag
tattccggggtggcgctggataaaagtgaatcccgcaccgactggctggcgcgcccgctg
accgagcgtcagtgtgaatatgccgcagctgacgtctggtacctgttgccgatcgccagc
caattaatggcggagaccgaccgcgcaggctggctgtcggcggcgctggacgaatgtcgt
ctgatgcagcagcgccgtcaggaggtggtcgacccggccgaggcctggcgcgacatcggc
aacgcctggcagctgcgtacccgccagctgggctgcctgcagctgctggcagagtggcgt
ctgcgcaaagcgcgtgagcgcgacctggcggtgaactttgtggtgcgggaagagcatctg
tggagcgtggcgcgctatatgcccaccagcctcggcgagctcgacagcctcgggttgtcc
ggcagtgaaattcgcttccacggcaaaacgttgattaacctggtcgagaaagcccaggcg
ctgccggaatcggccctgccggcgccgctgcagaacctcattgacatgccgggttaccgt
aaagcctttaaagatattaaagcgctggtgcaggaagtgagcgccgacaagggcgtgagc
gcggaactgctggcctcgcgtcggcagatcaaccagttgctgaactggcactggcagttg
aaaacgcaagccggtgagcctgagctgatttccggctggcgtggcgaactgatggccggg
cggctgaagtcgctgttaaacgactatccgcgctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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