KEGG   Ketogulonicigenium vulgare WSH-001: KVU_0899
Entry
KVU_0899          CDS       T01909                                 
Symbol
hfq
Name
(GenBank) Host factor Hfq
  KO
K03666  host factor-I protein
Organism
kvl  Ketogulonicigenium vulgare WSH-001
Pathway
kvl02024  Quorum sensing
kvl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kvl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KVU_0899 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    KVU_0899 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kvl03019]
    KVU_0899 (hfq)
   03036 Chromosome and associated proteins [BR:kvl03036]
    KVU_0899 (hfq)
Messenger RNA biogenesis [BR:kvl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     KVU_0899 (hfq)
Chromosome and associated proteins [BR:kvl03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    KVU_0899 (hfq)
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: AEM40738
UniProt: F9Y5I5
Position
946276..946509
AA seq 77 aa
MASDKQNLQDAFLNHVRKAKIPVTIFLVNGVKLQGVITWFDSFCVLLRRDGQSQLVYKSA
ISTIMPAQPISLYEGEE
NT seq 234 nt   +upstreamnt  +downstreamnt
atggcttctgataaacagaacctgcaggacgcgtttttgaaccatgtccgcaaagccaaa
atccccgtcacgattttcttggtcaatggcgtgaaactgcaaggtgtgattacgtggttc
gatagcttttgcgtgctgctgcgccgcgatggccaatcgcaactggtctacaaaagcgcg
atttcgaccattatgcccgcgcagcccatctctttgtatgaaggcgaagaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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