KEGG T01909: KVU

Ketogulonicigenium vulgare WSH-001: KVU_2334

Entry

KVU_2334          CDS       T01909

Symbol

gyrB

Name

(GenBank) DNA gyrase, B subunit

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

kvl Ketogulonicigenium vulgare WSH-001

Brite

KEGG Orthology (KO) [BR:kvl00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:kvl03032]
    KVU_2334 (gyrB)
   03400 DNA repair and recombination proteins [BR:kvl03400]
    KVU_2334 (gyrB)
Enzymes [BR:kvl01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     KVU_2334 (gyrB)
DNA replication proteins [BR:kvl03032]
Prokaryotic type
  DNA Topoisomerases
   KVU_2334 (gyrB)
DNA repair and recombination proteins [BR:kvl03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      KVU_2334 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook Toprim_4 HATPase_c_3

Other DBs

NCBI-ProteinID:

AEM42173

UniProt:

F9Y6Q3

Position

2468602..2471052

AA seq 816 aa
MSEPKPQPGDYGADSIKVLRGLDAVRKRPGMYIGDTDDGSGLHHMIYEVVDNGIDEALAG
HATSVYVKIHADSSVSVRDNGRGIPVGIHAEEGVSAAEVIMTQLHAGGKFNNTDESGNAY
KVSGGLHGVGVSVVNALSEWLELRIWRDGHEYHARFEHGNVVQHVKDLGPSDGERGTEVR
FLAAVRVAANEGTFSNLEYSYDVLERRLRELAFLNSGVRIVLEDERPAQPLKTELYYDGG
VREFVKYLDRSKTAIMPEPIFMVGERAGIGVEVAMWWNDSYHENVLPFTNNIPQRDGGTH
IAGFRAALTRTITKYAQDSGIAKKEKIDLTGDDAREGMTCVLSVKVPDPKFSSQTKDKLV
SSEVRPAVENLVGEKLAEWFEENPQMARMIVGKIIEAAQAREAARKARELTRRKSALDVN
FMAGKLKDCAEKDPSKTELFIVEGDSAGGSAQMGRDRLTQAILPLRGKILNVERARFDRM
LSSAEIGNLVMALGTGIGRDEFNLAKLRYHKIVIMTDADVDGAHIRTLLLTFFFRQMPQL
IEAGHVYIAQPPLYKVSRGKSEVYLKDQAAYDEYLIQQGADATVLKLGNGMELAGADLLR
VIEEARQLRRVLDAFPTSYQRHILEQAAIAGAFVPGVVDSDLQGVADRVATRLDLIAAEY
ERGWIGRITQDRGIRLARILRGVEEVRTLDGQMLRSGESRRAGSFTQSLQEVYGLPATLV
RKDRAQLINGPLDLLKAILSEGERGLQLQRYKGLGEMNPEQLWETTLDPDARTLLQVRVD
DMTEADDIFTKLMGDVVEPRREFIQNNALSVANLDF

NT seq 2451 nt +upstreamnt +downstreamnt
atgagcgagcccaagccgcagccgggtgattacggcgccgattccatcaaagttctgagg
ggcttggacgccgtgcgcaagcgcccgggcatgtatatcggtgacaccgatgacggctcg
ggtctgcaccacatgatctatgaagtcgtcgataacggcatcgacgaggcgctggccggt
catgccaccagcgtttacgtcaagattcacgccgatagctcggtctcggtgcgcgacaac
ggtcgcggcatcccggtcggcattcatgccgaagagggcgtctcggcggctgaagtcatc
atgacccagctgcatgcgggcggcaaattcaacaatacggatgaaagcggcaacgcctat
aaggtctcgggcggcctgcacggcgttggcgtctcggtggtgaatgcgctgtcggaatgg
ctcgagctgcgcatctggcgcgacggccatgaatatcacgcgcgtttcgagcatggcaat
gtcgtccagcacgtcaaagacctcggcccctcggacggcgagcgtggcaccgaggtgcgc
ttccttgccgctgtgcgtgtcgcggcgaacgagggcacgttctcgaaccttgaatattcc
tatgacgtgctggaacgccgcctgcgcgagctggctttcctgaactcgggcgtgcgtatc
gttcttgaggatgagcgccccgcccagccgctgaagacggaactctattacgacggcggc
gtgcgcgagttcgtcaaatacctcgaccgttcgaaaaccgcgatcatgcccgagccgatc
tttatggtgggcgagcgcgccggtatcggtgtcgaggtcgcgatgtggtggaatgacagc
taccatgaaaacgtgctgccctttaccaacaacatcccccagcgcgacggcggcacccat
attgcgggcttccgcgcggcgttgacgcgcaccatcaccaaatatgcgcaagacagcggc
atcgccaaaaaggaaaagatcgacctgaccggcgatgatgcccgcgaggggatgacctgt
gtcctgtcggtgaaagtgcctgatccgaaattctcgagccagaccaaggacaagctggtc
tcgtccgaggtgcgccccgcggttgaaaaccttgtcggcgaaaagctggccgaatggttc
gaagagaacccgcagatggcccgcatgatcgtcggcaagattatcgaggccgcccaagcc
cgcgaagccgcccgcaaagcgcgcgagctgacgcgccgcaaatccgcgctggacgtgaat
ttcatggccggcaagctgaaagactgcgccgagaaagacccctcgaaaaccgaactgttc
atcgtcgagggtgactcggccggtgggtcggcacagatgggccgcgaccgtctgacccag
gcgatcctgccgctgcgcggcaagatcctgaacgtcgaacgcgcgcggtttgaccggatg
ctgtcttcggccgaaatcggcaaccttgtgatggcgcttggcaccggcattggccgcgac
gagttcaatctggccaagctgcgctaccacaagatcgtcattatgaccgatgcggacgtc
gatggcgcgcatatccgcacgctgctgctgacgttcttcttccgtcagatgccgcagttg
atcgaggcgggccatgtctatatcgcgcagccgccactgtataaggtgtcgcgtggcaag
tccgaggtttacctgaaagatcaggctgcttacgacgaatatctgatccagcagggcgcg
gatgccaccgtgctgaaactgggcaacgggatggagcttgcgggcgccgatctgctgcgc
gtgatcgaggaagcgcgccagctgcgccgcgttcttgacgccttcccaaccagctatcag
cgccatattctggaacaggctgccatcgccggtgcctttgtgccgggcgtggtggacagc
gatttgcagggcgtggccgaccgtgttgccacgcgtctggatctgatcgccgctgaatac
gagcgcggctggattggccgcatcacgcaagatcgcggtatccgtctggcccgtatcctg
cgcggcgttgaagaggtgcggacattggacgggcagatgctgcgctcgggcgaaagccgc
cgcgcgggcagctttacccagtcgctgcaagaggtctacggcctgcccgcgacgctggtg
cgcaaggatcgtgcccagttgatcaatggcccgctggacctgctgaaagccatcctgtcc
gagggtgagcgcgggttgcaattgcaacgctataagggtctgggcgagatgaaccccgaa
cagctgtgggaaaccacgctggaccccgatgcccgcaccctgctgcaggtccgcgttgat
gatatgaccgaggccgatgacatctttaccaagctgatgggggatgtggtcgagccgcgc
cgcgagttcatccagaacaacgccctcagcgtcgcgaacctcgacttttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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