KEGG   Ketogulonicigenium vulgare WSH-001: KVU_PA0022
Entry
KVU_PA0022        CDS       T01909                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
kvl  Ketogulonicigenium vulgare WSH-001
Pathway
kvl03420  Nucleotide excision repair
kvl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:kvl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    KVU_PA0022
   03430 Mismatch repair
    KVU_PA0022
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kvl03400]
    KVU_PA0022
Enzymes [BR:kvl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KVU_PA0022
DNA repair and recombination proteins [BR:kvl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     KVU_PA0022
   MMR (mismatch excision repair)
    Other MMR factors
     KVU_PA0022
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C AAA_22 AAA_30
Other DBs
NCBI-ProteinID: AEM42442
UniProt: F9YAP0
Position
p1:complement(5037..6797)
AA seq 586 aa
MAEGQESPADAAGRIALERMFACLDEGRSFRLEAGAGAGKTYSLERALRRLIEKQGSALL
RQRQQIGCITYTNVAKDEIIARTNAHPAVRPETVHGFCWSVLQDFQPTLRELVPGLPTWE
ERLAETGGVGHRRIHYELGYPGVTDDQVSLRHEDVLSLMIQAMSRPKFRRVLTSRYPILL
IDEYQDTDAGFVDALKEWFLDRGEGPLIGLFGDHWQKIYGEGCGLVEHQALEVIDKQANF
RSVDPIVQVLNRMRPDLLQMVSDPAAQGETRVFHTNNWPGQRRTGQGGGHWKDDTSPEAA
RAYFQHMKDRLAAEGWDLSVEKTKILMLSHSILAREQGYENIRSIYGQFNDPWLKKDDPH
IKFLADQLEPACAAFEANRYGEMFEAFGSGMPRIRRHEDKIAWTNGMNVLIALRQTGTIG
EIIDFIAAQPHMRLPAAVEQREAKLAEVGDEPVEGEPRRITQLRKLRTVHYTELIALDRF
IDGHTPFATKHGVKGAEFENVMVIVGRGWNKYNFVQTLEWMDAAPPADKQDFFENNRNLF
YVACSRPKVRLALLFTQLVSPAAMAKLTELFGENNLVALPPDPVVT
NT seq 1761 nt   +upstreamnt  +downstreamnt
atggctgagggacaagaaagccccgcagatgccgctggtcgcattgctctggaacgcatg
ttcgcttgcctggatgaaggacgcagctttcgtctagaggcgggcgccggagctgggaaa
acctattctcttgagagagcacttcgcagattgattgaaaagcaaggctccgcgttgctg
cggcagcgccaacagatcggctgcatcacctacaccaacgtcgccaaggacgagatcatt
gccagaacgaacgcgcaccctgcggtgagacccgaaaccgtgcacggtttttgctggtca
gtccttcaggattttcagcctacgctgcgtgaactggttcccgggttgccgacatgggag
gagcggcttgcggaaaccggcggcgtcggtcatcgtcgtattcattatgaacttggctac
cccggcgtgacagacgatcaggtgtcacttcgccatgaagatgtattgtcgctgatgatt
caggcgatgagtcgccccaaatttcgtcgggttctgacttcacgatatcccattctgctt
atcgacgaatatcaggacacggatgccggtttcgttgatgcgttgaaagagtggtttctt
gatcgaggtgaaggccccttgatcggtcttttcggagaccactggcagaagatttacggc
gagggatgtgggctggtggaacaccaggcactggaggttatagacaagcaagcgaacttc
cggtccgttgatccgattgtgcaggtcctcaaccgtatgcgtccagacttgctgcagatg
gttagcgatccagctgcacagggtgagacccgtgtatttcatacaaacaactggccgggg
cagcgacgaaccggacagggaggcggccactggaaagatgataccagtcccgaggcagct
cgtgcttactttcagcatatgaaggatcggctggcagccgagggctgggatctatcggta
gagaaaacaaaaatactgatgctcagccacagtatacttgctcgggagcaaggatacgag
aacattcggagcatctatggccagttcaacgatccttggttgaagaaggatgatcctcac
atcaagtttcttgcggaccagcttgaacccgcctgcgctgcgttcgaggccaaccggtat
ggggaaatgttcgaggcgttcgggtcgggcatgccgcgcatccgtcgtcatgaagacaag
atcgcctggaccaatggcatgaacgtcctcattgcgttgcggcagactggaacgattggc
gagataatcgacttcatcgccgcccagccgcacatgcggctgcctgccgctgtggaacaa
cgcgaagcgaagctcgctgaggtcggagatgaacccgtagaaggggaaccccgccggatt
acacagcttagaaagctacggacggttcactatacggaattgatagcgttggatcgtttc
atcgacgggcacacgccatttgctacgaagcacggcgtgaagggcgcggagttcgagaat
gttatggtgatcgtgggacgtggctggaacaaatacaactttgtacagaccctagaatgg
atggatgcagcgcctcctgctgacaaacaggatttcttcgagaacaatcggaatttgttc
tatgttgcatgttcacgccccaaggtgcgcctagctttgctgttcacgcaactcgttagt
cccgcagcgatggcaaagctcacagagctgtttggtgagaacaatctcgtagccctgcct
cctgatccggtcgtaacatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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