KEGG   Klebsiella variicola DSM 15968: SP68_10270
Entry
SP68_10270        CDS       T03641                                 
Name
(GenBank) exodeoxyribonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
kvq  Klebsiella variicola DSM 15968
Pathway
kvq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:kvq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SP68_10270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kvq03400]
    SP68_10270
Enzymes [BR:kvq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     SP68_10270
DNA repair and recombination proteins [BR:kvq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SP68_10270
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_11 Ig_mannosidase
Other DBs
NCBI-ProteinID: AJE89623
Position
932973..936509
AA seq 1178 aa
MTDTAESLDPLRLPLRGERLIEASAGTGKTFTIAALYLRLLLGLGGESAYSRAISVEELL
VVTFTEAATEELRGRIRSNIHELRIACLRGESDNPLYSALLAEIDDKDDAAKTLLLAERQ
MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESRLRYQACADFWRRHCYPLTRDIA
AVIHDVWKGPRDLLKSLDRWLQGEAPQLKSPPAPDETLAERHQQIIARIDSLKQQWREQV
GEIEGVLENSGLDRRKYNRGNQGKWLEKVNAWAQEETLSYQLPDALEKFAQSFLLERTKA
GGEPPVHPLFSAVESLLASSLTLTDLVLARAMVEIRDAVAREKRRRGELGFDDMLSRLDE
ALRGDSGEALASAIRQRFPVAMIDEFQDTDPQQYRIFRRIWRQQPETALLLIGDPKQAIY
AFRGADIFTYMKARGDVAAHYTLDTNWRSSPGMVGSVNRLFSLSDNPFMFREIPFLPVKA
AAKNQGLCFTVDAADVPAMNVWLMPGDTVGSGDYQTFMAQLCATQIRDWLSAGQQGRALL
WRGETSRPVQASDITVLVRNRLEAAQVREALQTLGIPSVYLSNRDSVFETLEAQELLWLL
QAVLAPERENTLRSALATSMFGLTALDIENLNQDEQAWDALVEEFSDYRQIWRQRGVMPM
LRALMTARHIAENLLATRGGERRLTDILHISELLQEAASQLESEHALVRWLAQHIAEPDS
NAASQQMRLESDKHLVQIVTIHKSKGLEYSLVWLPFIARFRKQDQAFYHDRETFAAVLDL
GQDEASLELAEAERLAEDLRLLYVALTRAVWHCSLGVAPLSSRKSGNSDFHLSALGRLLQ
AGEAMDAAGLAARLADFCHGDIALQRPGELDLTPWQAPAATIPPLSARELQRRIADDWRV
TSYSGLQQHGFSGGQDLLPRLDVDAAGVGEVVEEPQLTPHQFPRGAAPGTFLHSLFEELD
FTQPVPEGWMAEKLQLSGFDAQWAPVLTDWLGGVLKTRLPGADIALNQLAARDKQVEMAF
YLPIAQLLTAERLDALIRQYDPLSADTPPLDFRQVRGMLKGFIDLVFRHEGRYYLLDYKS
NWLGEDREAYTRPAMEQAMRAHRYDLQYQLYSLALHRYLRHRLADYDYDRHFGGVIYLFL
RGMDGQEGGQGIFTTRPVRPLIDGLDQLFAGETQEETS
NT seq 3537 nt   +upstreamnt  +downstreamnt
atgaccgacaccgctgagtctttggatcccctgcgcttgcccctgaggggcgagcgcctg
atagaagcctctgcgggcaccggaaaaacctttaccatcgccgcgctgtatctgcggctg
ctgctggggctgggcggcgagtccgcctattcccgcgctatcagcgttgaagagctgctg
gtggtgacctttaccgaggcggcgaccgaagagctgcgcgggcgtatccgcagcaacatc
cacgaactgcgcatcgcctgcctgcgcggcgaatccgacaatccgctctacagcgcgctg
ctggcggagatcgatgataaagacgacgccgcgaagacgctgctgctggctgaacggcag
atggacgaggcggcggtattcaccatccacggcttttgccaacggatgctgagccttaac
gccttcgagtcgggcatgctgttcgagcagcaactgatcgaggatgaatcccgcctgcgc
tatcaggcctgcgctgacttctggcgccgccactgctatccgctgacccgcgatatcgcg
gcggtgatccacgacgtctggaaagggccgcgcgatctgctgaagtctcttgaccgctgg
ctgcagggcgaagcgccgcagcttaagtcgccgccggcccccgacgagacgctggctgaa
cgccatcagcagatcatcgcccgcattgactcgctcaagcagcagtggcgcgagcaggtg
ggcgagatcgaaggcgtgctggaaaattccgggctcgaccggcggaaatacaatcgtggc
aaccagggcaaatggcttgagaaagtgaacgcctgggcgcaggaagagacgttaagctac
cagctgcccgacgcgctggagaaatttgcccagtcgtttctgctcgagcgcaccaaagcc
ggtggcgaaccacccgtgcatcccctgtttagcgccgtggagtcgctgctggcctcctcg
ctgacgctcaccgatctggtgctggcgagagcgatggtcgagatccgcgatgcggtcgcc
cgcgaaaagcgccgccgcggcgagctggggtttgacgatatgctcagccggcttgacgag
gcgctgcgcggcgacagcggcgaggcgctggccagcgccattcgccagcgttttccggtg
gcgatgatcgacgaatttcaggacaccgacccccagcagtaccggatttttcgccgcatc
tggcgccagcagccggagacggcgctgctgctgatcggcgatccgaagcaggccatctac
gcctttcgcggcgccgatatctttacctatatgaaagcgcgcggcgacgttgccgcgcac
tacaccctcgataccaactggcgctcctcgccgggcatggtgggcagcgtcaatcggctg
ttcagcctcagcgataaccccttcatgttccgcgagatcccgtttctgccggtgaaggcg
gcggcaaagaatcaggggctgtgctttaccgttgacgcggcggacgtaccggcgatgaac
gtctggctgatgcccggcgacaccgtcgggtctggcgattatcaaacgtttatggcgcag
ctctgcgccacgcagatccgcgactggctgagcgccgggcagcaggggcgcgcgctgctg
tggcgcggggaaacctcgcgcccggtgcaggcctcggatatcaccgtgctggtgcgcaac
cggctggaggcggcgcaggtgcgtgaagcgctgcagacgctgggcatcccctcggtctac
ctctctaaccgcgacagcgtttttgagacgctggaggcccaggagctgctctggctgctg
caggcggtgctggccccggagcgggaaaataccctgcgcagcgcgctggcgacctcgatg
tttggcctgaccgcgctggatattgaaaacctgaaccaggatgagcaggcgtgggacgcg
ctggtggaagagttcagcgactaccgccagatctggcgtcagcgcggagtgatgccgatg
ctgcgggcgttgatgacggcccggcatatcgccgagaatctgctggcgacccgcggcggc
gagcggcgcttaaccgacattctgcatatcagcgaactgctgcaggaggcggccagccag
ctggaaagcgagcatgccctggtgcgctggctggcgcagcatatcgccgagccggacagc
aacgccgccagccagcagatgcgtctcgaaagcgataagcacctcgtgcaaattgtcacc
attcacaagtcaaaagggctggagtactccctggtctggctgccgtttatcgcccggttt
cgtaaacaggaccaggcgttctaccacgatcgcgagacgttcgcggcggtactggatctg
ggccaggatgaggccagtctcgagctggcggaggcggaacggctggcggaagatctgcgc
ctgctatacgtcgccctgacccgtgcggtctggcactgcagcctcggcgtggcgccgctc
agcagccggaaatccggcaacagcgatttccacctcagcgcgctggggcggctgttgcag
gcgggcgaagccatggacgccgccgggctggccgcgcggctggcggacttctgtcatggc
gatattgcattacagagaccgggcgagctggatctgaccccgtggcaggcgcccgcggcg
accatccccccgctgtcggcgcgcgagctgcagcgccgcatcgccgacgactggcgggtg
accagctactccggactgcaacagcatggtttcagcggcgggcaggatctgctgccgcgt
ctggatgtcgatgccgccggcgtcggcgaagtcgtggaagagccgcagctgactccgcac
cagtttccgcgcggcgccgcgccggggaccttcctgcacagcctgtttgaggagctggac
ttcacccagccggtgccggaagggtggatggcggagaagctgcagctgagcgggtttgac
gcgcagtgggcgccggtgctgaccgactggctggggggcgtgctgaagactcgcctgccg
ggagcggatattgcgctcaatcagcttgcggcgcgggataaacaggtggagatggcgttt
tatctgcctatcgctcagctgctgacggcggagcgccttgacgcgcttatccgccagtac
gatcccctctccgccgacacgccaccgctggatttccgccaggtgcgtggcatgctgaag
ggctttatcgatctggtcttccgccacgaaggccgttattacctgctggattacaaatcc
aactggctgggggaagaccgcgaggcctacacccggccggcaatggagcaggcgatgcgt
gcccaccgctacgatctgcagtatcagttgtacagcctggcgctgcaccgctatctgcgc
caccggctggccgattatgactatgaccgccacttcggcggcgtgatttatcttttcctg
cgcggcatggacgggcaggagggggggcaggggatcttcaccacccggccggtgagaccg
ctgattgacggtctggatcagctttttgccggagaaactcaggaggagacctcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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