KEGG   Ketogulonicigenium vulgare Y25: EIO_0608
Entry
EIO_0608          CDS       T01338                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
kvu  Ketogulonicigenium vulgare Y25
Pathway
kvu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:kvu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EIO_0608 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kvu03021]
    EIO_0608 (rpoZ)
   03400 DNA repair and recombination proteins [BR:kvu03400]
    EIO_0608 (rpoZ)
Enzymes [BR:kvu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     EIO_0608 (rpoZ)
Transcription machinery [BR:kvu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     EIO_0608 (rpoZ)
DNA repair and recombination proteins [BR:kvu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      EIO_0608 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: ADO41770
Position
complement(581401..581754)
AA seq 117 aa
MARVTVEDCVDKIPNRFELVMLAAHRAREIAAGSALTVPRDNDKNPVVSLREIAEETQLA
DDLRERMIEANQHEIEVDEPEDDSMALLMSAELDRPAQDDMTEERLLRELLQAQEGR
NT seq 354 nt   +upstreamnt  +downstreamnt
atggcacgtgtcaccgtcgaagattgtgtagacaagattccgaaccgtttcgaactggtc
atgctggccgcacatcgtgcacgcgagatcgctgcagggtcggccctgactgtgccgcgc
gacaacgacaagaaccccgttgtatcgctgcgcgagatcgccgaagaaacccagctggcc
gatgacctgcgcgagcggatgatcgaagccaaccagcacgagatcgaagtcgacgagccc
gaagacgattcgatggctctgctgatgagcgccgagctggatcgtcccgcccaggacgac
atgaccgaagagcgcctgctgcgcgagctgctgcaagcgcaagagggccgctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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