KEGG   Kyrpidia spormannii: CVV65_08280
Entry
CVV65_08280       CDS       T05215                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
kyr  Kyrpidia spormannii
Pathway
kyr02024  Quorum sensing
kyr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kyr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CVV65_08280
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CVV65_08280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kyr03019]
    CVV65_08280
   03036 Chromosome and associated proteins [BR:kyr03036]
    CVV65_08280
Messenger RNA biogenesis [BR:kyr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     CVV65_08280
Chromosome and associated proteins [BR:kyr03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    CVV65_08280
SSDB
Motif
Pfam: Hfq LSM DUF5608
Other DBs
NCBI-ProteinID: ATY84918
UniProt: A0A2K8N6F7
Position
complement(1617316..1617600)
AA seq 94 aa
MNKQTMNIQDTFLNQLRKDNIPVTVYLVNGFQIRGVIRAFDNFTIVVESEGKQMMVYKHA
ISTFTPQKAVSLHPPAQTGGDERRDVPPTDASRS
NT seq 285 nt   +upstreamnt  +downstreamnt
gtgaacaaacagacaatgaacattcaggacacgttcttaaaccaattgcgcaaagacaac
atcccggtgacggtgtatctggtgaacggctttcaaatccggggcgtgatccgggcattt
gacaattttaccattgtggtggaatcagaaggcaagcagatgatggtgtataagcacgcc
atctcgacgttcaccccccagaaggcggtgtccttgcacccacccgcccagaccggggga
gacgaacggcgcgacgtccctccgactgatgcttcccggtcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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