KEGG   Candidatus Liberibacter asiaticus gxpsy: WSI_05240
Entry
WSI_05240         CDS       T02506                                 
Name
(GenBank) NAD-dependent DNA ligase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
laa  Candidatus Liberibacter asiaticus gxpsy
Pathway
laa03030  DNA replication
laa03410  Base excision repair
laa03420  Nucleotide excision repair
laa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:laa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    WSI_05240
   03410 Base excision repair
    WSI_05240
   03420 Nucleotide excision repair
    WSI_05240
   03430 Mismatch repair
    WSI_05240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:laa03032]
    WSI_05240
   03400 DNA repair and recombination proteins [BR:laa03400]
    WSI_05240
Enzymes [BR:laa01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     WSI_05240
DNA replication proteins [BR:laa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     WSI_05240
DNA repair and recombination proteins [BR:laa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     WSI_05240
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     WSI_05240
   MMR (mismatch excision repair)
    DNA ligase
     WSI_05240
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      WSI_05240
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT PTCB-BRCT DNA_ligase_ZBD
Other DBs
NCBI-ProteinID: AGH17405
Position
complement(1157945..1160140)
AA seq 731 aa
MKKRQLIPIEALSIEQARKELSSLEQEISYHDDCYYQYSKPIILDSEYDALKRRCDAIAH
AFPDLARSEDPNGPLNKIGGEMNLSLFKVTHSIPTLSLEKIWNIEDLRKFITRIYRFWQK
KDDNSIFFTLEPKIDGTMITIRYEKGKFVYAALRGDGHSGEDVSACIRAIPTIPRVLSLN
IPEIIEVRGEVYISKNDFLALNDEMIAVGRKPYANPRNAASGILRRLNPTDITRYLNFFV
HGLGKTSEIFAKGQYEMLQKMRCLGFPVNNGVRQANTFHGIVSYYNEMKSIRSTLPYDID
GLVYKVDEFSLQKQLGERARSPRWMISHKFAEKQASTRLLDIDIQIGRTGILTPVARLEP
VNIGGALITNATLHNEDYIKGLDASGKVMRGGRDIRVGDRVLVKRAGEVIPKVVDIIVNE
RHPDAQPFSFPSFCPICQSRVVRDLNPKTGKLVAAHRCTGGLACSAQQLERLKHFVSRDA
FNIEGLGKQQLDFFFKSEDPAFSIRIPADIFTLQRRQQTSTTKIENILGFGDVSVTNLYD
SINKRRNISLERFIFSLGIRHVGAEIARSLAKYYLSYQNFAQEINNIIAHNNDDWLSLIR
VPLVGDIIAQAIVEFYQNPRNICAVEALLKEVSPSIGRHEKNVSSEIENKKLVFTGTLQK
IQRHKAQEYVTQLGAVVSAILSRKTDIIIVGDNPGSKLEKAQQLGVKIMNEEQFLFLLQQ
YNTTLRIHDDD
NT seq 2196 nt   +upstreamnt  +downstreamnt
atgaaaaaacgtcaattgattccaatcgaggcattgagtatcgaacaagctagaaaagaa
ttatcgtctcttgaacaagagatatcatatcatgatgattgttattatcagtattcaaaa
cctataatcttagattctgaatatgacgcattaaaaagacgttgtgatgctattgcacat
gcttttcctgatttagcacgctctgaggatcctaatgggcctctgaataaaataggggga
gaaatgaacctctccttatttaaagtgactcattctatcccaacattatcattagaaaag
atttggaatatcgaagatcttcgtaagttcatcactagaatttatcgtttttggcaaaaa
aaagatgataacagcattttttttactctggagcctaaaattgatgggacaatgattact
atacgatatgaaaaaggaaagtttgtttatgctgctttgcgtggtgacggtcatagcgga
gaggatgttagtgcttgtattcgtgctattccgacaattcctcgtgttttatcattgaat
attccagaaattatagaagtgcgtggtgaagtttacatctcaaaaaatgattttcttgcg
cttaatgatgaaatgattgcagtcggccgaaaaccctatgctaatcctagaaacgctgct
tctggcatattacgtcgtttaaatcctacggatattactcggtatttgaatttttttgtg
catggattaggaaaaacatctgagatattcgcaaaaggtcagtatgaaatgctacaaaaa
atgcgttgtctaggctttcctgttaataacggagttcgacaagcgaatacttttcacggt
atcgtatcctattataatgaaatgaaatcaatacgttctactcttccatatgatatagat
ggattggtatataaggtcgatgaattttctttacaaaaacaattaggagaacgagctcga
agcccacgttggatgatatcgcataaatttgcagagaaacaagcatctacgcgtctttta
gatattgatattcaaattggtcgtactggtattctcacgccggtagctcgtcttgaacct
gttaacataggaggtgctttaatcactaatgcaacattgcataatgaagattacatcaaa
ggattggatgcatctggtaaagtaatgcgtggaggaagggatattcgtgtaggggatagg
gtcttggtcaaaagagccggagaggtgattcctaaagttgtggatattattgtcaatgaa
agacatcctgatgctcaaccgttttcttttccttctttttgtcctatctgtcagagtcga
gtagtgcgtgatttaaatccgaaaacaggaaaacttgttgctgcccatcgttgtacggga
ggacttgcgtgctcggcacagcaattagaacgtcttaagcattttgtctcgcgagatgct
ttcaatatagaaggtttaggaaaacaacaattggatttcttctttaaatcagaagatcct
gctttttctattaggattcctgccgatatttttacattgcaacgtcgtcaacaaacttct
actacaaagattgagaatattctaggttttggcgatgttagtgtcaccaatctttacgat
tctattaataaaagacgcaatatttctttggaaagatttatattttccttaggtattcgg
catgttggcgcagaaattgccagatctttggcgaaatattatctctcatatcaaaatttt
gcacaagaaatcaacaacattattgcacataacaatgatgattggctgtctttaataaga
gttcctctagtaggagatataatagcgcaggctattgtagaattttatcagaatcctagg
aatatttgtgctgtagaagcactgttaaaagaagtatctccttctattgggcgtcacgaa
aaaaatgtcagctctgagatcgaaaataagaaattagtatttaccggaaccctgcagaaa
attcaacgccataaagcacaagaatatgtgactcagttaggtgctgttgtttctgctatt
ctttctcgtaaaactgatattattattgttggtgataatcctggttccaagttagagaag
gcacaacaactaggtgttaaaataatgaacgaagagcaatttttatttctattacaacag
tataatacaacgttgcgtatccacgacgatgactaa

DBGET integrated database retrieval system