KEGG   Labrenzia sp. PHM005: FJ695_12325
Entry
FJ695_12325       CDS       T06152                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
labp  Labrenzia sp. PHM005
Pathway
labp03030  DNA replication
labp03430  Mismatch repair
labp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:labp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FJ695_12325
   03430 Mismatch repair
    FJ695_12325
   03440 Homologous recombination
    FJ695_12325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:labp03032]
    FJ695_12325
   03400 DNA repair and recombination proteins [BR:labp03400]
    FJ695_12325
Enzymes [BR:labp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FJ695_12325
DNA replication proteins [BR:labp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FJ695_12325
DNA repair and recombination proteins [BR:labp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FJ695_12325
SSDB
Motif
Pfam: RNase_T RNase_H_2 Rv2179c-like DEDDh_C DNA_pol_A_exo1 PAS
Other DBs
NCBI-ProteinID: QDG79592
UniProt: A0A4Y6S2I7
Position
2741101..2742513
AA seq 470 aa
MLTTFSLRLRIFLLFLGLTAVTWGAVSLSLYVGFLRTEVTGVGSGFLFAGILANFGTLAV
FALFWLLFDENVAKPIERIAAAMRTRAHAGVEVSVDHHEARYLGDLAPAVSAVTGELSKV
SDGAEDIVAEETARLNAERAHLALLLTEIPVAIVLVSPTHQIMLYDGQAADVLGQVHVPR
LSASIFDYFSEDELRKACEQLTDKRREVEADVHGTRGNLTFKLRLKKLSQASGYMILIDN
TSARIAPDAARPLIYDFDLEVQDSERAFENRPLQEMSFTVFDTETTGLMPNKDEIVQIGA
VRVVNGRIVPGEEVDQLVNPGRPIPLASSKVHGITDEMVTDAPEALDAVEDFHGFARDSV
IVAHNAPFDMAFLHRYGKVLGLDWDHPILDTVLLSAVVFGANEEHTLDAVCLRLGIKIRP
EVRHTALGDAEATAEALCKLLPILASRGYKTFGEVIQETRKHGRLLKDMN
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgctgaccaccttcagcttgcggctgcggatctttctcctgtttttgggactgacagct
gttacctggggtgccgtcagcctttctctttatgttggttttctgcgtaccgaggtaacg
ggcgttggatctggtttcctgtttgcgggtattttggcgaacttcgggacgcttgcggta
ttcgcgctcttctggctgctgtttgacgaaaacgtcgcaaagccgatcgaacgcattgca
gcagccatgcgcacaagagcgcatgccggcgttgaggtttccgtcgaccatcatgaagca
cgttatcttggggacttggcgccagctgtgtccgctgtaacaggggaattgtccaaggtc
tcggacggggctgaggacattgtcgccgaagaaacggcgcggctgaacgcagaacgcgcc
catctggccttgcttttgaccgagattccggtcgcaatcgtcctggtcagcccgacccat
caaatcatgctgtatgacgggcaggccgcggatgtgctcggacaggtgcacgtcccgcga
ctgagcgcttcgatctttgactatttttccgaagatgaattgcggaaggcgtgtgagcag
ctgacagacaagcggcgggaagttgaggcggatgtccatggtactcgcgggaacctgaca
tttaagctgcgcttgaagaagctcagtcaggcgtccggctatatgatcctgatcgacaat
acgagcgcgcgcattgctcccgatgccgctcggccgctgatctatgattttgaccttgag
gtgcaggattcagagcgggcctttgaaaaccggcccctgcaggaaatgtccttcacggtg
tttgatacggaaacaacgggacttatgccgaacaaggacgagatcgtgcaaatcggtgcc
gtccgcgtcgttaatggccggattgtcccgggtgaagaagtggatcagctggtcaatccc
ggccgtcccattccgctggcatccagcaaagtgcacggcatcaccgatgagatggtcacc
gatgcgccggaagccctggatgctgtcgaggactttcacggttttgcccgggattcggtg
attgttgcccataacgcgccattcgacatggccttcctgcaccgctatggcaaagttctt
gggctggattgggatcatccgatccttgatactgtgttgctctctgctgtggtgtttggc
gcgaatgaagagcacacgctggatgcggtgtgtttgaggcttggcattaaaatccgtccc
gaagtccggcatacggcgctgggagatgcggaagcgaccgccgaagccttatgcaagctt
ttgccgatccttgcatcccgcggctacaaaaccttcggtgaggtcattcaggagacccgc
aagcacgggcggctgctgaaagacatgaactga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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