KEGG   Labrenzia sp. PHM005: FJ695_21455
Entry
FJ695_21455       CDS       T06152                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
labp  Labrenzia sp. PHM005
Pathway
labp03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:labp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    FJ695_21455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:labp03021]
    FJ695_21455
   03400 DNA repair and recombination proteins [BR:labp03400]
    FJ695_21455
Enzymes [BR:labp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     FJ695_21455
Transcription machinery [BR:labp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     FJ695_21455
DNA repair and recombination proteins [BR:labp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      FJ695_21455
SSDB
Motif
Pfam: RNA_pol_Rpb6 MinE
Other DBs
NCBI-ProteinID: QDG78221
UniProt: A0A4Y6RYN0
Position
4739589..4739990
AA seq 133 aa
MARVTVEDCIDKVENRFELVLLAAHRARMISSGSPLTIDRDNDKNPVVALREIAEQTVSP
EDMKEDLIHSLQKFVEVDEPEAEAVPVVAVPGQHQVTQVNTVDDSAVEFDRMSEEDLLRG
LEGLVPPERTDDV
NT seq 402 nt   +upstreamnt  +downstreamnt
atggcgcgcgtgaccgtcgaggactgcatcgacaaggtcgaaaaccggtttgagctggtg
ctgcttgctgcgcatcgcgctcgcatgatttccagcggatctccgctgacgatcgaccgc
gacaacgataaaaaccctgtcgtcgccttgcgtgaaatcgccgagcagaccgtcagcccg
gaagacatgaaagaagacctgattcattcgcttcagaagtttgttgaagtggatgaaccg
gaagcagaagccgtgccggttgtcgcggttcctggccagcatcaggtcactcaggtcaat
accgtggacgacagtgccgtcgagtttgaccgcatgtctgaagaagacctgctgcgcggc
ctggaaggcctggttccgccagagcggaccgacgacgtttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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