KEGG   Labrenzia sp. PHM005: FJ695_24025
Entry
FJ695_24025       CDS       T06152                                 
Symbol
metH
Name
(GenBank) methionine synthase
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
labp  Labrenzia sp. PHM005
Pathway
labp00270  Cysteine and methionine metabolism
labp00450  Selenocompound metabolism
labp00670  One carbon pool by folate
labp01100  Metabolic pathways
labp01110  Biosynthesis of secondary metabolites
labp01230  Biosynthesis of amino acids
labp04980  Cobalamin transport and metabolism
Module
labp_M00017  Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:labp00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    FJ695_24025 (metH)
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    FJ695_24025 (metH)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    FJ695_24025 (metH)
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    FJ695_24025 (metH)
Enzymes [BR:labp01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     FJ695_24025 (metH)
SSDB
Motif
Pfam: Met_synt_B12 S-methyl_trans Pterin_bind B12-binding_2 B12-binding MtrH
Other DBs
NCBI-ProteinID: QDG78686
UniProt: A0A4Y6S1X4
Position
complement(5299072..5302800)
AA seq 1242 aa
MIKSDAFKRLQDLAKSRILVLDGAMGTEIQLLKLDEAAYRGDRFMDWPSDVKGNNDLLSL
TLPDSIRQIHVDYLEAGADIVETNTFSSTTIAQADYGMEELAYELNYESARLAREACDQV
TAKDPSRPRFVAGALGPTNRTASISPDVNNPGFRAVSFDDLRIAYAEAVRGLIKGGADIL
LVETIFDTLNAKAALFAIEEVFEETGKELPVMISGTITDLSGRTLSGQTPEAFWNSVRHT
NPLTIGLNCALGAKEMRAHVDEIGRVADTLVCAYPNAGLPNEFGEYDESPEHMAGLVGEF
AEAGLVNVVGGCCGTTPAHIKAIAEAVEGKKPREIPEVDRFMRLSGLEPFTLTPEVNFVN
VGERTNVTGSARFRKLIKEGDYPTALEVARQQVENGAQIIDINMDEGLLDSEEAMVTFLN
LVAAEPDIAKVPIMIDSSKWSVIEAGLKCIQGKGVVNSISMKEGEEAFLEQAKLIRRYGA
AVVVMAFDEQGQADTFARKTEICARSYEVLTKKAGFAPEDIIFDPNIFAVATGIEEHDNY
GVDFIEATGWIRENLPHAHVSGGVSNLSFSFRGNEAVREAMHSVFLYHCIQKGMDMGIVN
AGQLAVYNDLDTELRELCEDVVLNRRSDATDRMLEAAERWKGEGGKKKEADLTWRTWDVA
KRLEHALVHGIADYVEDDTEEARQSFDRPLHVIEGPLMDGMNVVGDLFGSGQMFLPQVVK
SARVMKKAVAYLMPFMEKEKEEQGLEGHSSAGKILMATVKGDVHDIGKNIVGVVLQCNNF
EVIDLGVMVPAAKILETALEEKVDIIGLSGLITPSLDEMCHVAAEMEREGLDIPLLIGGA
TTSKIHTAVKIHPNYDKGQAIYVTDAGRAVGVASKLMSEDGRAPYYGEVRTEYADIAEKH
AAGRGAGRRVLLKDARDNAFKADFVADTPVKPKTLGTTVFDNFPLEELVPVIDWTPFFST
WEIKGRYPQVLTDDRYGVAAKALYDDARRMLDEIVEKKQLTARGVVGLWPANAVGDDIEV
YTGENRGDVAATFYTLRQQMARTAGGRANVALSDFIAQKSDGVGDWLGGFAVTSGHGEDE
LVARYANAADDYNKILAQSLADRLAEAFAEKLHEIVRKDIWGYAADETLSNEDLIAEKYQ
GIRPAPGYPAQPDHTEKDTLFRLLDAEKLTGIQLTESRAMLPGSSVSGLYFAHPGSHYFG
VGKIERDQIEDYAARKGWDLSYAERWLAPILNYDPARMEAAE
NT seq 3729 nt   +upstreamnt  +downstreamnt
gtgatcaagtcagacgctttcaagcgccttcaagatttagccaagtcccgcattctggtg
ctggacggggccatgggaaccgagattcagctgttgaaactggatgaggcagcctatcgc
ggggaccggttcatggattggccctccgatgtgaagggcaacaacgatcttctcagcctg
acccttccagactccatccggcagatccatgtcgattacctggaagctggcgcggacatt
gttgaaaccaacaccttttcctccaccaccatcgcccaggccgattacggcatggaagag
ctggcctatgagctaaactatgaaagtgcgcgccttgcgcgcgaagcctgtgatcaagtg
acagccaaggatccttcccggccgcggtttgtggcaggtgcccttgggccgaccaaccgg
acggcgtcgatctcgccggacgttaacaacccggggttccgggctgtgtcttttgacgat
ctgcgcattgcctatgcggaggccgtacgcgggctgatcaaaggcggcgcggatatcctc
cttgtcgaaacgatcttcgatacgctcaacgccaaagctgcgctctttgccattgaagag
gtctttgaggaaaccggcaaggaattgccggtgatgatttcagggacgattaccgatctg
tccggccgaaccctctccggccagaccccggaagccttctggaactccgtgcgtcacacc
aatccgctgaccatcggtctcaattgtgcgctgggcgccaaggaaatgcgggcgcatgtc
gatgagattggccgggtcgccgatacgcttgtctgtgcttatccgaatgccggtttgccg
aacgagtttggcgaatacgacgagagcccggaacatatggccggtctcgttggggaattt
gctgaagctggtctcgtgaatgttgttggtggctgttgcggcacaacgcccgcgcacatc
aaggcgattgccgaggctgttgaaggcaaaaaaccgcgtgaaatcccggaagtcgaccgg
ttcatgcgtctgtcgggtctggaaccgttcacgctgaccccggaagtcaatttcgtcaac
gtcggtgaacgcaccaacgtcactgggtctgcacgctttcgcaagctgatcaaggaaggc
gattacccgacagccctcgaagttgcccgccagcaggtcgaaaacggcgcccagatcatc
gatatcaatatggatgagggactgctggattccgaagaggccatggtcaccttcctcaat
ctggtggccgccgagccggatatcgccaaggtgcctatcatgatcgacagctccaagtgg
agcgtcatcgaagctggcctgaagtgcattcaaggcaaaggcgtcgtcaactccatctca
atgaaggaaggcgaagaagcgtttctggaacaggccaagctgatccgccgctatggcgca
gctgttgttgtcatggcatttgatgagcagggccaggcggacacctttgcccgtaagact
gaaatctgcgcgcgctcctatgaagttctgaccaaaaaagccggttttgcgccggaagac
atcatcttcgatccgaatatctttgcagtggccactggcatcgaagagcacgacaattat
ggcgtcgacttcatcgaggcgacgggctggatccgggaaaacttgccccatgcccacgtc
tccggaggtgtctcgaacctgtccttctctttccgcggcaatgaggccgtgcgcgaagcg
atgcattctgtgttcctctaccactgcattcaaaaaggcatggatatggggatcgtcaac
gctggacagttggcggtctacaacgacctggacacagagctgcgtgagctttgtgaagac
gtcgttctaaaccgccggtctgacgcaaccgaccgcatgctggaagcagccgaacgctgg
aagggcgagggcggcaagaaaaaggaagccgacctcacctggcggacctgggacgttgcc
aagcgtctggagcacgcactggtccatggtatcgccgactatgtggaagatgatacggaa
gaggcgcgccagtcctttgaccgtccgctccacgtcatcgaaggccccttgatggacggc
atgaacgtcgtcggtgatttgttcggttccggccagatgttcctgccgcaggtggtgaaa
tccgcccgtgttatgaaaaaggccgtcgcctatttgatgcccttcatggagaaggaaaag
gaagaacaagggcttgagggccattcttccgcaggcaaaatcctgatggcgaccgtgaag
ggcgatgtccatgatattggcaagaacattgttggcgtcgtgcttcagtgcaacaacttc
gaggtcattgatctcggggtaatggtgccggctgccaagatcttggaaacggctttggaa
gaaaaagtcgacatcatcggcctttccgggctgatcacaccgtcccttgatgagatgtgc
cacgtagcagctgaaatggagcgggaaggtctcgatatcccgctcctgatcggcggggcg
accacgtcgaagatccataccgccgtcaagatccacccgaactacgacaaggggcaggca
atctatgtgaccgatgcgggccgggcggttggtgtcgcttcgaaactgatgagtgaggac
gggcgggcgccttattacggtgaggtgcgcacggaatatgccgatattgccgaaaagcat
gctgctggtcgcggagcgggacgacgtgtgcttttaaaggatgcgcgggacaatgccttc
aaggccgactttgtggcagataccccggtaaaaccaaaaacacttggcaccacggttttt
gataatttcccgctggaagagctggtcccggtgatcgactggacgccgtttttctcaaca
tgggagatcaagggccgctatccgcaagtcctcaccgatgatcgctatggcgttgcggcc
aaggcgctttatgacgacgcgcggcggatgctcgacgaaattgtcgagaagaagcagttg
accgcgcgcggtgttgttggtctctggccggctaatgccgttggcgatgatattgaggtc
tataccggtgaaaaccgtggtgacgtcgccgcaacgttttacactttgcgccagcagatg
gcgcggacagcaggcgggcgggcgaacgttgctttgagtgacttcattgcccagaagtcc
gacggtgtcggcgattggcttggcggttttgccgtcacttcgggtcacggcgaggatgag
ctggttgcgcgctatgcaaatgcagccgatgactacaacaagatcctggcccaatccctt
gctgaccggcttgcggaagcctttgccgaaaaactgcacgagatcgtgcgcaaagacatt
tggggctatgcggcggacgaaacgctctccaacgaggatctgattgccgagaaataccag
ggcatccggccagcaccgggctacccggctcagccggaccatacggaaaaggacacgctg
ttccgcctgctcgatgcagagaaattgaccggcattcaattgaccgaaagccgggccatg
ctacctggttcttcggtctccggactgtattttgcccatcctggcagccattatttcggt
gtcggcaagatcgaacgggatcagatcgaagattatgcagcgcgcaagggctgggatctt
tcttatgccgagcgctggcttgctccgatcctcaactacgatccggcgcggatggaagcg
gccgaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (31)   

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