KEGG   Labrenzia sp. VG12: CHH27_07180
Entry
CHH27_07180       CDS       T04984                                 
Name
(GenBank) ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
labr  Labrenzia sp. VG12
Pathway
labr00230  Purine metabolism
labr00240  Pyrimidine metabolism
labr01100  Metabolic pathways
labr01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:labr00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    CHH27_07180
   00240 Pyrimidine metabolism
    CHH27_07180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:labr03400]
    CHH27_07180
Enzymes [BR:labr01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     CHH27_07180
DNA repair and recombination proteins [BR:labr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    CHH27_07180
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TACO1_YebC_N
Other DBs
NCBI-ProteinID: ASP33052
UniProt: A0A222F3D7
Position
1572766..1576449
AA seq 1227 aa
MRIERRYTKEGQSPYASIEFRNATSEIRNPDGSIVFRLEDIQVPAQFSQVASDILAQKYF
RKAGVPAKLKPVEENTVPSWLWRHEADEAALADLPEDERYGSEIDGRQVFDRLAGTWTYW
GWKGGYFDKEADAQAFYDELRYMLATQKVAPNSPQWFNTGLHWAYGIDGPGQGHYYVDFQ
TGKLTKSKSSYEHPQPHACFIQSVGDDLVNEGGIMDLWVREARLFKYGSGTGSNFSHVRS
EGEKLSGGGKSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDVDHPDIEEYISWKVKE
EQKVAALVTGSKICQKHLTAIMRACVNCEADNGDCFDPSKNPALKREIRAAKKMMVPENY
IQRVIQFARQGFTKIDFPTYNTDWDSEAYLTVAGQNSNNSVRVTDGFLNAVVEDGEWDLT
ARKTGGVLKTVKAKELWEQIGYAAWASADPGLQYHSTINDWHTCLADGEIRASNPCSEYM
FLDDTACNLASLNLMQFRNEDRSFAIDNYEHAVRLWTIVLEISVLMAQFPSKEIAELSYK
FRTLGLGYANIGGLLMTSGISYDSDEGRALCGALTAVMTGVAYATSAEMAGELGSFPGYK
KNAKHMLRVMRNHRRAAHGETEGYEGLNTNPVALDHASCPDPIIVERAKRAWDRALELGE
KNGYRNAQSTVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRAVPEALRV
LGYAESEIGEIEAYAVGHGSIDQAPGINPSALKAKGFTDESLTKLKDGMKSAFDIKFVFN
RWTLGDEQMKALGVSDEQLEDTEFDLLTFLGYSKSEIEAANTHVCGAMTLEGAPFLKEEH
YPVFDCANPCGRIGKRFLSVESHIRMMAAAQPFISGAISKTINMPNDATVEDCKEAYMLS
WKLALKANALYRDGSKLSQPLNAQLLADEDEDEDDLVEDIAAKPQAAKAEVVAERIVERI
VERVVREQEKLPGRRKGYTQKAKIGGHTVFLRTGEYDDGRLGEIFLDMNKEGSALRAFIN
NFAISVSLGLQYGVPLEEYVDAFTFTKFEPAGMVQGNDAIKNATSILDYVFRELAVSYLG
RHDLAHVPPEAFNGPVDAGAVKHMEKGASGGVVSHGLVRGQTERFRLVSGTEPAGEITEA
VTMELAGSVSAQTSAVATAFARGGEAAAAAVEVTTAPAPAKTAAQQIAQARMKGYEGESC
AECGNFTMVRNGTCLKCDTCGSTSGCS
NT seq 3684 nt   +upstreamnt  +downstreamnt
atgcggatcgagcggcgctataccaaggaaggtcaatcgccttacgcaagcattgaattt
cggaacgcaaccagtgagatccgcaatccggatggctccattgtgttccgcctcgaggac
attcaggtcccggcccagttttcccaggtcgcgtccgatatcctggcgcagaaatatttc
cgcaaggcaggcgtgccggcaaagctgaagccggttgaagaaaacaccgttccctcctgg
ctgtggcgccacgaagccgatgaagctgccctcgccgacctgccggaagacgaacgctac
ggttctgaaatcgacggccgacaggtttttgaccgtctcgccggcacctggacctactgg
ggctggaagggcggctatttcgacaaggaagccgacgcccaggctttctacgacgagctg
cgttacatgctggcgacccagaaggtggcgccgaattccccgcagtggttcaacaccggc
ctgcactgggcctatggcatcgatggtccgggccagggccactactatgtcgatttccag
accggcaagctcaccaaatccaagagctcctacgagcatccgcagccgcatgcctgcttc
attcagtccgtcggcgacgacctggtcaatgaaggtggcatcatggacctgtgggtccgc
gaggcacgcctcttcaaatacggctccggcaccggctccaacttctcccatgtgcggtcg
gaaggcgaaaaactctccggcggcggcaagtcttccggcctgatgagcttcctgaagatc
ggcgaccgggcggctggcgcgatcaagtccggcggcaccacccgccgcgcggccaagatg
gtcgtggtcgatgtcgatcacccggatatcgaggaatacatcagctggaaggtcaaggaa
gagcagaaggtagcggcgctcgtcaccggttccaagatctgccagaaacacctgaccgcc
atcatgcgtgcctgcgtcaactgcgaggcggacaatggtgactgtttcgatccgtccaag
aacccggctctgaagcgcgagatccgcgcggccaagaaaatgatggtgccggaaaactac
atccagcgcgtcatccagttcgccaggcagggcttcacaaagatcgatttcccgacctac
aacacggactgggattccgaagcctacctgacggtggccggccagaactccaacaactcc
gtgcgcgttaccgacggcttcctgaacgccgttgtcgaagacggcgaatgggacctgacc
gcccgcaagaccggtggtgtcctgaagaccgtcaaggccaaggaactctgggaacagatc
gggtatgccgcctgggcctccgccgatccgggcctgcaatatcacagcaccatcaacgac
tggcacacgtgcctcgccgacggcgaaatccgcgcgtccaatccgtgctcggaatacatg
ttcctcgatgacacggcctgtaacctggcatcgctgaacctgatgcagttccgcaacgag
gaccgctccttcgccatcgacaattacgaacatgccgtccgcctgtggaccatcgttctg
gaaatctcggtgctgatggcgcagttcccgtccaaggaaattgcagaactgtcctacaag
ttccgcactcttggtctcggctacgccaatatcggcggcctcctgatgacctccggcatt
tcctatgacagcgacgaaggccgcgcgctctgcggtgccctgaccgccgtcatgaccggc
gttgcctacgccacctccgccgaaatggccggtgaactcggctctttcccgggctacaag
aaaaacgccaagcacatgctgcgcgtcatgcgtaaccaccgccgcgccgcccatggcgag
acggagggctacgagggcctcaacaccaatcctgtggcgctcgaccatgcctcctgcccg
gacccgatcatcgtggaacgggcgaagagggcctgggaccgtgccctggagctcggtgaa
aagaacggctaccgcaacgcccagtccaccgtgatcgcgccgacaggcacgatcggtctg
gtgatggactgcgacacgaccggcatcgagccggacttcgccctggtgaagttcaagaag
ctggccggcggcggttacttcaagatcatcaaccgcgccgttcccgaagccctgcgcgtg
cttggctatgcggaaagcgagatcggcgagatcgaggcttatgcggtcggccacggctcg
atcgaccaggcaccgggcatcaacccgtctgccctgaaagccaagggcttcaccgacgag
agccttaccaagctcaaggacggcatgaagtcggccttcgacatcaagttcgtcttcaat
cgctggaccctcggcgacgagcagatgaaggcacttggcgtctccgacgaacagctggaa
gacacggaattcgacctcctgacattcctcggctattccaagtccgagatcgaagccgcc
aacacccatgtctgtggtgccatgaccctggaaggcgcgcccttcctgaaggaagaacac
tacccggtcttcgactgcgccaacccgtgtggccgtatcggcaagcgcttcctttcggtg
gaaagccacatccgcatgatggccgcagcccagccgttcatctccggcgcgatctccaag
acgatcaacatgccgaacgatgcgaccgtcgaggactgcaaggaagcctacatgctgtcc
tggaagctggcgctcaaggccaatgcgctttatcgcgacggctccaagctcagccagccg
ctcaacgcccagctcttggcagatgaggacgaagacgaggatgatctcgtcgaggacatc
gccgccaagccgcaggccgccaaggccgaggttgtcgccgaacgcattgtcgagcgcatt
gttgaacgcgtcgttcgcgaacaggagaaacttcccggtcgccgcaagggttacacccag
aaggccaagatcggcggtcacaccgtgttcctcagaacaggcgaatatgacgacggccgc
ctcggcgagatcttcctggacatgaacaaggaaggctctgctctccgcgccttcatcaac
aacttcgccatttccgtctcgctcggcctgcaatacggcgtgccgctggaggaatatgtc
gacgccttcaccttcaccaagttcgagccggccggcatggttcagggcaacgatgcgatc
aagaacgcaacgtcgatcctcgactatgtcttccgcgaactggcggtgtcctatctcggc
cgtcacgaccttgcccacgtcccgccggaagccttcaacggcccggtcgacgccggcgcg
gtcaagcacatggaaaagggtgcctccggcggtgtcgtctcgcatggtctcgtgcgcggc
cagaccgagcgcttccgtctcgtctccggcaccgaaccggctggcgaaatcaccgaggcg
gtgaccatggaactggctggttcggtgtcggcgcagacatccgctgtcgccacggccttt
gcccgcggcggcgaggcagccgccgcggcggtcgaagtcaccacggctccggcccccgcc
aagacagctgcccagcagatcgcccaggcccgcatgaagggttatgaaggcgaaagctgc
gcggaatgcggcaacttcaccatggtccgcaacggcacctgcctgaaatgcgacacctgc
ggctccacgagcggctgcagctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (33)   

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