KEGG   Labrenzia sp. VG12: CHH27_16190
Entry
CHH27_16190       CDS       T04984                                 
Name
(GenBank) ABC transporter
  KO
K06147  ATP-binding cassette, subfamily B, bacterial
Organism
labr  Labrenzia sp. VG12
Brite
KEGG Orthology (KO) [BR:labr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:labr02000]
    CHH27_16190
Transporters [BR:labr02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    CHH27_16190
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_16 AAA_22 AAA_29 RsgA_GTPase ABC_ATPase AAA_21 AAA_25 nSTAND1 MMR_HSR1
Other DBs
NCBI-ProteinID: ASP34588
UniProt: A0A222F6N0
Position
3504169..3505977
AA seq 602 aa
MADAPVSDRKTDTKTNRRSLKPLTRLIPYLQKHKGMAIGALVALFSAAIITLILPAAVRR
MIDFGFGADDPALVNSYFAVLIGVVCALATASSIRYFLVMWIGERVVAELRSDVFAHLTR
LSPAFYDSAKSGEILSRLTADTTQIKSAFGASASQAMRNLIMFAGASVMMVVTSPRLSVI
VLAAIPVILVPILGFGRQVRKRSRFAQDTLADASAYAGEMLGSVKTLQAFTHEDRSAGRY
GGAVEEAFKAARKAIMARAALTGFAIMVIGASIVAVLWIGASDVFSGRITGGELSQFLLY
SILAAGSLATLSEVWGELSQAAGAAERLSELLDVQSEIRAPANPVSLPESPRGDIAFENV
SFAYQNAEHMPVVRDLELTIAPGETVAVVGPSGAGKSTLFSLLMRFYDPVSGTIRLNGVG
LSELDPEDLRRHIALVPQDTAIFGASIAENIAYGRPDASREDVVAAAQAALAAPFIEAMA
DGYDTMVGERGVTLSGGQRQRIAIARAVLKDAPVLLLDEATSALDAESERLVQQALDKLM
EGRTTLVIAHRLATVLKADRIVVMEDGRIVETGTHAELTAAGGLYAKLARLQFDAEQEAL
AG
NT seq 1809 nt   +upstreamnt  +downstreamnt
gtggcagacgcccctgtttcagaccgcaagacggacacaaagaccaatcgccgttcgtta
aaaccgctgacgcggctgatcccctatcttcagaaacacaagggcatggccatcggtgca
ctggtcgccctgttctcggccgcaatcatcacgctgatcctgccggccgccgttcgccgc
atgatcgactttggctttggcgccgacgacccggcgctggtgaattcctatttcgccgtc
ctgatcggcgtggtctgcgccctggcaacggccagttcgatccgctacttcctggtcatg
tggatcggtgagcgggttgttgccgaacttcgctccgatgtctttgcccacctgacccgg
ctcagccccgccttttacgacagcgccaagtccggcgagatcctgtcgcgcctgaccgcc
gatacgacccagatcaagtcagcatttggcgccagcgcctcccaggcgatgcgtaacctg
atcatgttcgccggcgcctcggtgatgatggtggtcaccagcccgcgtctctccgtgatc
gtgctggctgccattcccgtcattctcgttcccattctcgggtttggtcgtcaggttcgc
aaacgctcgcgctttgcccaggataccctggcagatgcctccgcctatgccggcgagatg
ctgggttcggtgaaaaccctgcaggcgttcacgcatgaagacagaagcgccgggcgctac
ggcggcgccgtcgaggaggctttcaaggctgcccgcaaggccatcatggcgcgcgcggca
ttgaccggctttgccatcatggtgatcggcgccagcatcgttgcggtcctgtggatcggg
gccagcgacgtgttttccggccgcatcacagggggggaactcagccagttcctgctctac
tccattctcgccgccgggtcgctggcaacgctttccgaggtctggggcgaactctcccag
gccgccggtgccgctgagcgcctgtcggagcttctggatgtgcagtcggaaatccgcgcc
cccgccaatccggtcagcctgccggagagcccgcgcggagacattgccttcgaaaacgtc
tccttcgcctatcagaatgcggaacacatgccggtggtccgggatctggagctgaccatc
gcgccgggagaaaccgttgctgtcgtcggtccgtccggtgccggcaagtccaccttgttc
agcctgctgatgcgcttttacgacccggtttccgggacgatccggctcaatggtgtaggc
ctgagcgagcttgatccggaagatctgcgccgacacatcgccctggtgccccaggacaca
gcgattttcggggccagcattgccgagaacattgcctatggcaggcctgacgccagccgg
gaagacgtggttgcagcggcacaggctgccctggccgcccccttcatcgaggcgatggcg
gatggctatgacacgatggtcggcgagcgcggtgtcactctctctggtggacaacgccag
cgcattgccattgcccgcgccgtcctgaaagacgctccggtcctgctcctggatgaagcg
acgagcgcgcttgacgcggagagcgaacggctggtgcagcaggcgctcgacaagctgatg
gaaggccgcacgacgctggtgattgcccaccgtctggcaacggtcctgaaggccgaccgg
attgtggtgatggaagacggccgcatcgtcgaaaccggcacacatgccgagctaacggcc
gccggcgggctctacgccaagctggcccggctgcaattcgatgccgagcaggaggctctg
gcggggtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (19)   

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