KEGG   Labrenzia sp. VG12: CHH27_25085
Entry
CHH27_25085       CDS       T04984                                 
Name
(GenBank) exodeoxyribonuclease VII large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
labr  Labrenzia sp. VG12
Pathway
labr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:labr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    CHH27_25085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:labr03400]
    CHH27_25085
Enzymes [BR:labr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     CHH27_25085
DNA repair and recombination proteins [BR:labr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     CHH27_25085
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon RecJ_OB
Other DBs
NCBI-ProteinID: ASP36120
UniProt: A0A222FBK6
Position
complement(5436844..5438412)
AA seq 522 aa
MSESQSNVAEFSVSEISFSIKRTMEDAFGYVRVRGELGRISRPGSGHIYLDLKDDRAVLS
GVIWRGVASKLKIQPEQGLEVIATGKITTFPGQSKYQMVIDALEPAGAGALMALLEERKK
KLAAEGLFAEERKRRLPPMPKVIGVVTSPTGAVIRDILHRISDRFPIHVLVWPVRVQGET
SGAEVANGIRGFNALAEGGPIPRPDLLIVARGGGSIEDLWGFNEEAVVRAAAASEIPLIS
AVGHETDWTLIDLAADLRAPTPTGAAEIAVPVKAELMAMLDDRSRRLNSGLVRFVTGRRT
ELRAASAALPAPQDLLALPRQKFDNLANGLERALIVSTRTHRTHFQNLAGRLSPLLLSRL
SGKARQDLDQISDRQQRALKVAVGQKRQSFAAQAARLTPSRLVQQTTLGTERLTGLADRL
DRAYLARINQESARLDGLQKLLKSLSYKDVLARGYAVVRDDSGHPVRSAAKVASGSALSI
ELADGTVDAVAMSDSAGPKPVKAKAKKQSTGKTPPVDQGSLF
NT seq 1569 nt   +upstreamnt  +downstreamnt
gtgagcgaatcccagtccaacgtcgctgaattctccgtttccgaaatctccttttccatc
aaacgcacgatggaagacgcgttcggctacgtgcgcgtgcgcggggaactggggcggatt
tcgcgaccaggatccggccatatctacctggacctgaaggatgaccgggcggttctgtcc
ggggtgatctggcgcggtgtcgcgtccaaattgaagatccagcctgaacagggactggaa
gtgatcgccaccggcaagatcaccacgtttccgggccaatccaaataccagatggtgatt
gacgcgctggaacctgccggtgccggcgccctgatggcgctgttggaagaacgcaagaaa
aagcttgccgccgaaggcctgtttgcggaagagcgcaagcgccgtcttccgcccatgccg
aaggtgatcggcgttgtcacctcgccgaccggcgccgtcatccgcgacatcctgcaccgg
atttccgaccggtttccgatccatgtgctggtctggcctgtacgtgtccagggcgaaaca
tccggagccgaagttgccaacggcattcgcggcttcaacgcgcttgccgaaggtgggccg
atcccgcggccggatctcctgatcgtcgcacgtggcggcggcagcatcgaggacctttgg
ggcttcaacgaagaggccgtggtgcgcgcggcggcggccagcgagatcccgctgatctcg
gccgtcggccacgagaccgactggacgctgatcgatctggctgcggacctgcgcgctccg
acgccgacgggcgctgctgaaatcgccgttccggtgaaggccgagctgatggcgatgctc
gacgaccgctcccgccggctcaattccggcctggtacgctttgtcaccggccggcggacg
gaactgcgggccgccagcgccgccctgccggcgccacaggacctcctggccctgccgcgc
cagaaattcgacaatcttgcaaatggcctggaacgggcgctcatcgtcagcacgcgcacg
caccggacccatttccagaaccttgccggacggttgtcgccgctccttttgtcccgcctg
agcggcaaggcccgacaggatctcgaccagatcagcgaccggcaacagcgcgctctcaag
gttgctgtcggccagaagaggcagtcttttgcagctcaggccgcgcggctgacaccgtcg
cggcttgtgcaacagacaacgctcggcaccgaacggctcaccggtctcgccgaccggctc
gaccgcgcgtatcttgcccggatcaatcaggaatcagctcgactggacggcctgcagaaa
ctgctgaaatcactctcctacaaggacgtcctggcgcgcgggtatgcagtggtgcgcgac
gacagcggccatccggtccggtccgccgccaaagttgcctcgggctctgccctgtcgatc
gaactggcggacggaactgtcgatgcggttgccatgagcgacagcgcgggccccaaaccg
gtcaaggcgaaggcgaaaaaacagtcaaccggaaaaacaccacctgtggatcagggcagc
ctgttctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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