KEGG   Ligilactobacillus acidipiscis: LAC1533_0840
Entry
LAC1533_0840      CDS       T05349                                 
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
laca  Ligilactobacillus acidipiscis
Pathway
laca03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:laca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LAC1533_0840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:laca03400]
    LAC1533_0840
DNA repair and recombination proteins [BR:laca03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LAC1533_0840
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LAC1533_0840
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD Oxidored_nitro AAA_30 AAA_19 AAA_22 AAA_7 AAA_16 P-loop_SecA Rbsn HEM4 AAA_5 AAA AAA_18
Other DBs
NCBI-ProteinID: SFV40260
UniProt: A0A1K1KS24
Position
I:927876..929876
AA seq 666 aa
MVIERQDDHEFELVSKYQPTGDQPQAIDELTTGIKNGEKAQILLGATGTGKTFTISNVIK
NVNKPTLVLAHNKTLAGQLYGEFKEFFPNNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSS
INDEIDKLRHSATSSLLERNDVIVVASVSSIFGLGDPSEYKAHTISLRVGQEIERDRLLG
QLVDIQFERNDIDFQRGRFRVRGDVVEIFPASHDERALRVEFFGDEIDRIREVDPLTGEI
LGDRDHVAIFPATHFMTNEERMEEAVSGIEEELKDRTAEMKADNKLLEAQRLEQRTTYDV
EMLKEMGYCSGIENYSRHMDGRKPGEPPFTLLDFFPKDFLIVVDESHVTMPQVRGMYNGD
RSRKQMLVDYGFRLPSALDNRPLKLAEFEKHVNQIVYMSATPGPYEHEQTDDVVEQIIRP
TGLLDPEVEVRKTEGQMEDLVAEINKRVERKERVFVTTLTKKMAEDLSDYFKELGIKVKY
LHSDIKTLERTEIIRDLRLGKFDVLVGINLLREGIDVPEVSLIAILDADKEGFLRNERSL
IQTIGRAARNEHGHVILYADNVTDSMQRAMDETQRRREIQQKYNKDHGVIPQTIKKDIRA
SISGVLPVNDKKKESEGVDFSNMKKSDQKEMIESLENQMRQASKQLNFEDAATLRDTILE
LKAQIS
NT seq 2001 nt   +upstreamnt  +downstreamnt
atggtgatcgaaagacaagatgatcatgaatttgaacttgtttcaaagtatcaaccgact
ggtgaccaacctcaagcaatcgatgaattgaccactggaatcaagaatggcgaaaaagca
cagattttattgggcgcgacagggacaggtaaaacttttactatttcaaatgtaattaag
aatgttaataagccaacactggtattagcgcacaataaaacattagcggggcaattatat
ggtgagtttaaagagttctttcctaataatgctgtcgaatattttgtaagttattatgac
tattaccaaccggaagcttatgtgccctcaagtgatacgtatattgagaaagactcaagt
atcaatgacgagatcgataagttgcggcattcagccacaagttctttgttagaaagaaac
gatgtgatcgttgttgcctcagtttcttctatcttcggattaggtgatccgtcggaatat
aaagctcacacgatttcgttacgtgttggtcaagagatagaacgtgaccgtttgttgggt
caactagtggatattcaatttgagcgcaacgacatcgattttcaacgtggtcgttttcgt
gttcgtggtgatgttgtggaaattttcccagcttctcacgatgagcgtgctttaagagtc
gagttctttggtgacgaaatcgatcgaattcgtgaggtcgatccattaactggtgagata
ttgggtgatcgtgatcacgtagccatctttccggctacccactttatgactaacgaggaa
cgaatggaagaagccgttagtggtattgaagaggaattaaaagataggaccgccgagatg
aaggctgacaataaattgttggaagctcaacgtttggaacaacggactacttatgacgtt
gaaatgttgaaagaaatgggttattgttcaggaatcgagaattattcacgccatatggat
ggacgcaaacctggagagccgccatttacactgcttgatttctttccaaaagattttttg
atcgttgttgatgaatctcacgttactatgccacaggtgcgtggtatgtataatggtgac
cgttctcggaaacaaatgctggtcgattatggctttcgattaccaagtgcgcttgataat
cgaccgctaaaactagctgaattcgaaaaacatgtcaaccaaatcgtttacatgtctgcg
actccaggtccatatgaacatgaacagactgatgatgtggtcgaacagatcattcggcca
actggtttgttggatccagaagttgaggtgcgaaaaactgaagggcaaatggaagatctg
gtcgcggagatcaataaacgggttgaaagaaaagaacgtgtctttgtaactaccttgact
aaaaaaatggctgaagatttatctgattactttaaggaattagggatcaaggtcaaatat
cttcattcggatatcaagactttagaaagaactgagatcattcgtgacttgcgtttgggt
aagtttgatgttttagtaggaattaatttgctgcgtgaagggatcgatgttcctgaggtt
tctttgatagctattttagatgcagataaagaagggttcttacgtaatgaaagatctttg
atccaaactatcggacgggctgctagaaatgagcatggacatgttattttgtatgcagat
aatgtgactgattcaatgcaaagagcgatggatgaaactcagagacgtcgtgagatccaa
caaaaatataataaagatcatggtgttattcctcagaccattaaaaaagatattcgggct
tcgatctctggagtattgcctgttaatgataagaagaaggaatctgagggagttgatttc
tcaaacatgaagaagtcagaccaaaaagaaatgatcgagagcttagaaaatcaaatgagg
caagcgtcaaaacagcttaactttgaagacgcagcaactttacgtgatactattttggaa
ttaaaagcacagatcagttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (26)   

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