KEGG T05349: LAC1533

Ligilactobacillus acidipiscis: LAC1533_1208

Entry

LAC1533_1208      CDS       T05349

Name

(GenBank) DNA-binding protein HBsu

K03530

DNA-binding protein HU-beta

Organism

laca Ligilactobacillus acidipiscis

Brite

KEGG Orthology (KO) [BR:laca00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:laca03032]
    LAC1533_1208
   03036 Chromosome and associated proteins [BR:laca03036]
    LAC1533_1208
   03400 DNA repair and recombination proteins [BR:laca03400]
    LAC1533_1208
DNA replication proteins [BR:laca03032]
Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    LAC1533_1208
Chromosome and associated proteins [BR:laca03036]
Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    LAC1533_1208
DNA repair and recombination proteins [BR:laca03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      LAC1533_1208

SSDB

Motif

Pfam:

Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 DUF2267

Other DBs

NCBI-ProteinID:

SFV40628

UniProt:

A0A1K1KP76

Position

I:1327648..1327923

AA seq 91 aa
MANKAQLIETVAEKTGLTKKDATVAVDAVFGSIQDFLKDGEKVQLIGFGNFEVRERAARK
GRNPQTGAEIQIPASKVPAFKPGKALKDVVK

NT seq 276 nt +upstreamnt +downstreamnt
atggcaaacaaagcacaattgatcgaaactgttgcagaaaaaacaggtttgacaaagaag
gacgcaactgttgcagttgacgctgttttcggttcaattcaagacttcttgaaggacggc
gaaaaagttcaacttattggttttggtaacttcgaagtacgcgaacgcgctgctcgtaaa
ggccggaacccacaaacaggtgcagaaattcaaattcctgcaagcaaagtccctgcattt
aagccaggcaaagctctgaaggatgttgttaaataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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