KEGG   Ligilactobacillus acidipiscis: LAC1533_1677
Entry
LAC1533_1677      CDS       T05349                                 
Name
(GenBank) RNA methyltransferase, TrmA family
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
laca  Ligilactobacillus acidipiscis
Brite
KEGG Orthology (KO) [BR:laca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:laca03009]
    LAC1533_1677
Enzymes [BR:laca01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     LAC1533_1677
Ribosome biogenesis [BR:laca03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    LAC1533_1677
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 TRAM Met_10 PrmA Methyltransf_25 Methyltransf_15 MTS Cons_hypoth95 Methyltransf_11 RrnaAD PCMT Methyltransf_32 UPF0020 TRM N6_N4_Mtase Methyltransf_12 Methyltransf_4 Methyltransf_23
Other DBs
NCBI-ProteinID: SFV41098
UniProt: A0A1K1KQD5
Position
I:complement(1824498..1825874)
AA seq 458 aa
MKKKTPVTKNDELTATITDLTYQGMGVAKIDGYPLFVAGALPGEQVKLHVLKADKKYGFA
KAVEYLTTSPERVAVGKKELVQTGIAPLQHWAYPAQLKYKRKLVVDLLQKAHLSHLEVAQ
TVGMDEPRHYRNKAQVPAREYQGQLTTGFFRRGSHNFIQLEDYEIQDPRIDEVILAVRDI
LREFNVPAYNEEKHTGVIRNVMVRRGHYSGEVMVVLITRTKKLKGAAEISAKIQEQCPDV
VSVQQNINPDQTNVILGKTTKVMRGRNYIQDQLNGLTFNISAQSFYQVNPVQTEKLYARA
VELADLHGDETVIDAYCGIGTISLSLAKAAKKVYGVEIVPQAIEDAKENARLNKLDNLHF
EVGTAEETMKKWADNGIKPAVIVVDPPRKGLTADFIEAAAKTAPQKIVYVSCNPATLVRD
IERFGEQGYSVKRPLEPFDQFPQTTHVESVTVLERTEK
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgaagaaaaaaacacccgtcactaaaaatgacgaattaaccgcaacgatcacggactta
acgtaccaaggcatgggagttgccaagatcgacggctatccattgtttgttgctggtgcc
ttaccaggcgagcaggtcaaactgcacgttttgaaggctgataagaaatatggttttgcc
aaggcagtcgagtatttgactaccagccctgagcgagttgccgttggtaaaaaagaactc
gttcaaacggggatcgcgcccttgcagcactgggcttatccagcacaattgaaatataag
cgcaaattagtagtcgatcttttacaaaaagcacatttgtcacacttagaagtcgctcaa
acggtgggcatggatgaaccacgtcactatcggaataaagcacaggtcccagcacgcgaa
taccaaggccagctgacgactggttttttccgtcgaggcagccacaactttatccagctt
gaagattatgagatccaagatccgcggatcgatgaagtgatcctcgcagtccgcgatatt
ttacgcgaattcaacgtgccagcttataatgaggaaaaacacaccggtgtgatccgtaac
gtgatggtccgtcgtggtcattatagcggtgaagtgatggtcgtcttgatcacacggact
aagaagctgaagggtgccgctgagatctcggctaaaattcaagaacaatgtcctgatgtt
gtcagcgttcaacaaaatatcaatccagatcagacgaatgttatcttaggcaagacgact
aaggttatgcgtggacgaaactacattcaagaccaattaaatggcttaaccttcaatatt
tcggcacaatcattctaccaggtcaatccagtgcaaacagagaaactctatgctcgggca
gttgagctagctgatctgcacggtgatgaaaccgtgatcgatgcatactgtggtatcgga
actatttctctcagtttagccaaagctgctaaaaaagtttatggcgtggaaattgtaccc
caggccattgaggacgctaaggaaaatgctcgtttgaataaacttgataatttgcatttt
gaagtaggaacggctgaggaaacgatgaaaaaatgggctgataatggtattaagcccgct
gtgatcgttgttgatccaccccgtaaaggtttgacggccgacttcatcgaagcagctgct
aaaactgctccgcaaaaaattgtctatgtcagctgtaatccggctacattagtccgcgac
atcgagcgttttggcgagcagggttactctgtcaaacgtccgctggaaccattcgatcaa
tttccgcaaacgacacatgtcgaatccgtaaccgttcttgaacgcacagaaaaatag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (28)   

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