KEGG   Lachnoclostridium sp. YL32: A4V08_01705
Entry
A4V08_01705       CDS       T04430                                 
Name
(GenBank) DNA topoisomerase
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
lacy  Lachnoclostridium sp. YL32
Brite
KEGG Orthology (KO) [BR:lacy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lacy03032]
    A4V08_01705
   03400 DNA repair and recombination proteins [BR:lacy03400]
    A4V08_01705
Enzymes [BR:lacy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     A4V08_01705
DNA replication proteins [BR:lacy03032]
 Prokaryotic type
  DNA Topoisomerases
   A4V08_01705
DNA repair and recombination proteins [BR:lacy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      A4V08_01705
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C
Other DBs
NCBI-ProteinID: ANU44725
Position
complement(507218..509452)
AA seq 744 aa
MAEKILRTEYSEEMQRSYMNYSMSVITARAIPDARDGLKPVQRRVLYDMRELHLDHDKPH
RKSARIVGDTMGKYHPHGDSSIYETLVVMSQNFKKGMALVDGHGNFGSIEGDGAAAMRYT
EARLEKFAEEVYLKDLDKTVNFVPNYDETEKEPEVLPVRVPNLLINGAEGIAVGMSTSIP
PHNLGEVVDVVQAYIDNPEVTTQELMEFMPGPDFPTGGVIANKSELPQIYETGMGKIKLR
GKFEVELGKRKADKDKLVISEIPYTMIGAGINKFLVDVADLVESKKLTDVVDISNQSNKE
GIRIVLELRKDADIDKIKNILYKKTKLEDTFGVNMLAIADGRPETLNLKEILRNFLNFQY
ENTERKYNVLLQKEMDKKEVQEGLIAACDCIDLIIAILRGSKNLKDAKACLTTGDVTNIH
FKVPGFEEDAKKLAFTERQASAILEMRLYKLIGLEILALEKEHRETLRKIAEYKKILGSR
AQMNRVIKEDLAAIKAEFATPRRTLIEDGPEAVYDESAVAVQEMVFVMDRFGYCKLLDKS
TYDRNQETVDNEQVHVVKCLNTDKICLFAASGSLYQIKAMDVPAGKLRDKGTPIENLSKF
DGAKDTIVYLTSAENMKGRIFVFATRMAMVKQVPAAEFETNNRVVAATKLQDGDELAAVI
PVEGQTEVVIQTTGGVFLRFALEEISMLKKASRGVRGIRLSKNEELERLYLIGENPIVDY
KGKEVHLNRLKLAKRDGKGSKVRL
NT seq 2235 nt   +upstreamnt  +downstreamnt
atggctgaaaagatattacggactgaatacagtgaggaaatgcagagaagctacatgaac
tattccatgagcgtcatcactgcaagggctatccccgatgcaagggacggcttaaagccg
gtacagcgccgggtcctctatgatatgagggagcttcatctggaccacgataagccccac
aggaaatcggcgcgtatcgtgggagataccatgggtaagtatcatccccacggcgacagc
tccatttacgagacactggttgtcatgagccagaatttcaaaaagggaatggccctggtg
gacgggcacggcaacttcggctccatagaaggggacggggcagccgccatgcgttacacg
gaggcgcgtctggagaagtttgcggaggaggtctacctaaaggatctggataaaaccgtg
aatttcgttcccaactacgacgagacggaaaaggaaccggaggtgcttcccgtcagagtc
cccaaccttctgattaacggggcggagggcattgccgtgggcatgagcacaagcattccg
ccccacaacctaggcgaggtggtggacgtggtccaggcgtatattgataatccggaggtg
accacgcaggagctgatggagtttatgccggggccggattttcccaccggcggcgtcatt
gccaataagagcgagctgccgcagatttacgagacaggcatgggcaaaatcaaactcagg
ggcaagttcgaggtggagcttggaaagcgcaaggcggacaaggataagctggttatctcg
gagattccctataccatgattggcgccggaatcaataagtttctggtggatgtggccgat
ctggtggagagcaagaagctgacggatgtggtggatatctccaaccaatccaacaaagag
gggatccgtatcgtgctggagctgcgcaaggacgcggatattgacaagataaaaaatatc
ctctataaaaaaacaaagctggaggatacattcggtgtcaatatgctggccattgcggac
ggccgccctgagacgctgaacctgaaggaaatcctgaggaatttcctcaacttccagtat
gagaacacggagcgcaaatacaatgtccttctccagaaggaaatggataaaaaggaagtg
caggaaggacttattgcggcctgcgactgtattgacctgatcatagccatcctgagggga
tccaaaaacttaaaggatgccaaggcgtgtctgaccacaggcgatgtgaccaacattcat
ttcaaggtgccgggttttgaggaggacgcgaagaagcttgcctttacggagcgccaggca
tccgccattttggagatgcgtctctataaattaatcggactggaaatcctggccctggaa
aaggagcacagggaaaccttaaggaagattgcggagtataagaaaatcctgggaagcagg
gcccagatgaaccgcgtcatcaaggaggacctggctgccatcaaggctgaattcgccacc
cccaggcgaaccctgattgaggatggacctgaggcagtgtacgatgagagcgccgtggct
gtccaggagatggtttttgtgatggaccggttcggatactgcaagctgttagataagtcc
acctatgatcggaaccaggaaaccgtggacaatgagcaggtacatgtggtgaaatgtctg
aatacggacaaaatctgtctctttgcggccagcggcagcctgtaccagattaaagccatg
gatgtgcccgccggcaagctgagggacaagggaacgcccattgaaaatctgagtaaattc
gacggcgctaaggataccattgtttacctgaccagcgcggagaacatgaagggcaggata
tttgtattcgccaccaggatggccatggtaaagcaggtgcccgcggcggaatttgagacc
aataaccgggtggtggcagccaccaagctccaggatggggatgagctggcggccgtgata
ccggtggagggccagaccgaggtggtgatccagacaacgggaggtgtgttcctgcggttt
gccctggaggagatatccatgcttaaaaaggcgtccagaggcgtcagaggcatccggctg
tccaagaatgaggagctggagaggctgtatctgattggcgagaatcccattgtggattat
aaaggtaaggaagtccatttaaaccgtctgaaactggctaagagggacgggaaaggcagc
aaagtgaggctgtag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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