KEGG   Lachnoclostridium sp. YL32: A4V08_32475
Entry
A4V08_32475       CDS       T04430                                 
Name
(GenBank) 23S rRNA pseudouridine synthase F
  KO
K06182  23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
Organism
lacy  Lachnoclostridium sp. YL32
Brite
KEGG Orthology (KO) [BR:lacy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lacy03009]
    A4V08_32475
Enzymes [BR:lacy01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.21  23S rRNA pseudouridine2604 synthase
     A4V08_32475
Ribosome biogenesis [BR:lacy03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    A4V08_32475
SSDB
Motif
Pfam: PseudoU_synth_2 S4 Peptidase_S11 Phage_XkdX S4_2
Other DBs
NCBI-ProteinID: ANU49835
Position
6777386..6778141
AA seq 251 aa
MEERLNKWLSRMGVCSRREADRLIEAGKVLVDNRPASMGQKVTPGQKVVCNGKMVRVDKS
HKPRPVLLAVNKPRGIVCTTTDKDRAENIVDFLGYPERIYPVGRLDKDSEGLLLMTNQGA
LVNKIMRSGNAHEKEYIVTIDKLVTEHFLEQMAGGIRLPELDQVTRPCKVKKVERNTFSI
ILTQGLNRQIRRMCEVCGCQVRRLVRVRIMNIRLGNLRTGAYRQITKEEYEELTGLLKDS
SSLSLKERKNR
NT seq 756 nt   +upstreamnt  +downstreamnt
atggaagaacgtttaaataaatggctgagccggatgggagtctgctccagacgcgaggcg
gaccgtctgattgaggccggcaaggtgctggtggacaaccgtcctgcctccatggggcag
aaagtaacacccggacagaaggtggtctgcaatggaaagatggtccgggtagacaaaagc
cacaagcccagaccggtgcttttggcagtgaataagccaaggggcattgtatgtaccacc
accgacaaggacagagctgagaacatcgtggactttttggggtatcctgagcggatttac
cccgtgggaaggctggataaggattcagagggactgcttctcatgacaaaccagggggct
ctggtgaataaaatcatgagaagcggaaatgctcatgagaaagagtatattgtcaccata
gataagctggtgacggaacattttctggaacagatggcaggagggatccggcttcctgaa
ctggaccaggtgaccaggccctgcaaggtgaaaaaggtggagcggaatacattttccatc
attctcacccagggcctgaaccggcagatacggcgaatgtgtgaagtctgcggctgtcag
gtaaggcggctggtgcgggtgcgtatcatgaacatacgcctgggcaatttgaggactgga
gcttaccgtcagataacgaaggaggagtatgaggagcttacagggcttcttaaggactcc
tccagtctgtcccttaaggagagaaagaatcgataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system