KEGG   Roseibium aggregatum: B0E33_24720
Entry
B0E33_24720       CDS       T04723                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
lagg  Roseibium aggregatum
Pathway
lagg03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lagg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    B0E33_24720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lagg03021]
    B0E33_24720
   03400 DNA repair and recombination proteins [BR:lagg03400]
    B0E33_24720
Enzymes [BR:lagg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     B0E33_24720
Transcription machinery [BR:lagg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     B0E33_24720
DNA repair and recombination proteins [BR:lagg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      B0E33_24720
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD DUF211 RNA_pol_L_2
Other DBs
NCBI-ProteinID: AQQ06391
UniProt: A0A0M6XZC5
Position
5306304..5307326
AA seq 340 aa
MTIQKNWQELIKPTKLEIKPGEDPRFLATVVAEPLERGYGLTLGNALRRILLSSLQGAAV
TAVQIDGVLHEFSSIPGVREDVTDIVLNIKEIAIRMEGEGPKRMVVRKQGPGVVTAGDIQ
TVGDVEVLNPELVLCTLDEGAEIRMEFTVNTGKGYHSSDRNRPEDAPIGLIPVDSLYSPV
KKVSYKVENTREGQVLDYDKLTLTVETDGSVKPEDAVAFAARILQDQLSIFVNFEEPQRE
VAEDSVPELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRK
SLNEIKEVLAQMGLHLGMEVANWPPENIDDLAKRYEDHQY
NT seq 1023 nt   +upstreamnt  +downstreamnt
gtgaccattcaaaaaaactggcaagaactgatcaagccgaccaaactcgagatcaagccg
ggtgaagacccgcgcttcttggcaaccgtcgttgccgagccgctcgagcgtggctacggt
ctgacccttggcaacgcgctgcgccgtatcctgctgtcttctctgcagggtgccgccgtg
actgccgttcagatcgatggcgttctgcatgagttctcgtcgatcccgggtgtccgggaa
gatgtcaccgacatcgtgctgaatatcaaggaaatcgccatccgcatggaaggcgagggt
cccaagcgcatggtcgtgcgcaaacagggtccgggtgttgtcaccgccggcgatattcag
actgttggcgacgtcgaggttctcaatccggaactggtgctctgcacgctggatgaaggc
gctgaaatccgcatggaattcaccgtcaacaccggcaagggctaccattcttccgatcgg
aaccgtccggaagatgcgccgattggcctgatcccggtcgacagcctctactctccggtc
aagaaggtctcctacaaggtggaaaacacccgtgaaggccaggttcttgactatgacaag
ctgaccctgactgtcgaaaccgatggttccgtcaagccggaagacgccgtggcattcgct
gcacgcattctgcaggatcagctctccatcttcgtcaacttcgaagagccgcagcgtgaa
gtcgccgaggacagcgtcccggaactggctttcaaccctgcgcttctgaagaaggtcgac
gagctggaactgtctgtacggtctgcaaactgcctgaagaacgacaatatcgtgtatatt
ggcgatctcattcagaagaccgaagcggaaatgctgcggaccccgaatttcggccgcaag
tcgctgaacgaaatcaaggaagttctcgcccagatgggtctccatctcggcatggaagtt
gccaactggccgcctgagaacatcgatgatctcgccaagcgctacgaagaccatcagtac
taa

DBGET integrated database retrieval system