KEGG   Amylolactobacillus amylophilus: LA20533_07960
Entry
LA20533_07960     CDS       T05031                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
lah  Amylolactobacillus amylophilus
Brite
KEGG Orthology (KO) [BR:lah00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lah03032]
    LA20533_07960
   03400 DNA repair and recombination proteins [BR:lah03400]
    LA20533_07960
Enzymes [BR:lah01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     LA20533_07960
DNA replication proteins [BR:lah03032]
 Prokaryotic type
  DNA Topoisomerases
   LA20533_07960
DNA repair and recombination proteins [BR:lah03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      LA20533_07960
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim Toprim_4 C1_2
Other DBs
NCBI-ProteinID: APT19184
UniProt: A0A0R1YL25
Position
1519880..1521955
AA seq 691 aa
MPKKNLVIVESPAKAKTIEKYLGRNYHVVASLGHIRDLPKSQMGIDFEHNYEPKYISIRG
KGETIKNLKKEAAKVDNVYLAADPDREGEAIAWHVSHILGLPDGSKNRVVFNEITKDAVK
NSFKTPRSIDMDLVDAQQARRVLDRIVGYSISPILWAKVKKGLSAGRVQSIALNLVITRE
KEIKAFNPEEYWTIDAEFAKGRTKFVSSFYGVNGKKKELKNNDEVKELLGQIDKNKPFDI
TAVVKKERRRQPAAPFTTSSLQQEANKRLNYKTRKTMMIAQQLYEGINLGKEGTVGLITY
MRTDSKRISSVAKHDAAKFIHEEYGEQFAAHKPQTVKNQEGAQDAHEAIRPSSVFRTPES
LKDILSRDQMRLYQLIWSRFVASQMTAAVYDTVRADIEQNGVTFRTNGSKIKFAGFTKVY
DLSDAKTSKKDELPELLEGEQVKLSKTDPAQHFTQPPARYTEASLVKALEENGVGRPSTY
APTIDTIQKRYYVKLEGKSFVPTDLGEIVDALIEEFFPDIVNIDFTAQLENDLDSVEEGQ
KNWVTVVDEYYKPFEKELTKADSEIEKVQIKDEPAGFNCDICGAPMVIKLGRFGKFYACS
RFPDCRNTKPIVKEIGVTCSKCHIGQVVEKKSKRNRLFYGCSRYPECDFVSWDRPIGRDC
PKDGHFLVEKKVKGGRRVVCPNGDYEEEIQK
NT seq 2076 nt   +upstreamnt  +downstreamnt
atgcctaagaagaatctcgtgattgtagaatcacctgctaaagccaaaactattgaaaaa
tatctggggcgcaattatcatgttgtggctagcctcggacatattcgtgatttgccaaag
tcgcagatgggaatcgatttcgaacataattatgaaccaaagtacatatccattcgtggt
aagggcgaaaccatcaagaatcttaaaaaagaggcggcaaaggttgataacgtttatctc
gcggccgatccggaccgtgagggtgaggccatcgcgtggcatgtgtcgcatattctggga
ttacccgatggctcaaagaaccgcgtggttttcaatgaaataacaaaagatgccgtgaaa
aattcgtttaagacgccacgttcgattgatatggatctagtcgacgcacagcaggctcgt
cgtgtcttagaccggatcgttggatactctatctcacctattctgtgggcgaaagtgaag
aagggtctgagtgctggtcgtgttcaatctatcgcactcaatctggttatcacgcgtgaa
aaggaaataaaggcgttcaatcctgaagagtactggacgattgacgcagagtttgctaaa
ggtagaaccaaatttgtcagctccttttatggtgtgaatggcaagaaaaaagagttaaaa
aacaacgatgaagtaaaagagttactgggtcaaatagataagaataaaccatttgacatt
actgcggtcgtcaaaaaggaacggcggcgccagccagctgctccctttaccaccagctca
ctccaacaagaagctaataaacggttgaactacaagactagaaagaccatgatgattgcg
caacagctttacgagggaattaacctcggtaaagagggcacggtcggtttgattacgtac
atgagaacggactctaagcggatctcaagcgttgctaagcacgatgctgctaagtttatt
catgaggaatacggggaacagttcgcagcccataagccacaaacggtaaagaaccaagaa
ggagcccaagatgcccatgaggcaatccggccatcaagtgtttttcggacgccagagagc
ttgaaagacatcctctcgcgggatcaaatgcgactataccagctgatttggtctcgcttc
gttgccagtcagatgaccgcagcggtttatgataccgtacgggcggatatcgagcaaaat
ggtgttacttttaggaccaacggctccaagattaaatttgcgggtttcacgaaagtatat
gatctgagtgatgcgaaaacaagtaagaaggacgaattaccagagcttttggagggtgag
caggtcaaactttctaagaccgatcctgcacagcacttcacgcagccgccagctcgttac
acagaagcaagcttagtcaaagcgcttgaggagaatggcgtcggtcggccatcaacttac
gcaccgacgatagatacgattcaaaaacgatattacgtgaagctcgaagggaagtcgttt
gtgccgactgacttgggtgaaattgtcgatgcgttgattgaagagttcttcccagatatt
gtaaatattgacttcacagcgcaacttgaaaatgatctagactccgtcgaagaaggtcag
aagaattgggtgactgtggtcgacgagtactacaagccatttgagaaagagctgactaag
gcagactctgaaatcgagaaagttcagataaaggatgaaccagccggcttcaattgtgat
atctgtggtgcaccgatggtcattaaactaggccgtttcggtaagttttatgcttgttca
cgtttcccagattgtcgtaacaccaagccgatagtcaaggaaattggcgtgacatgttcg
aaatgtcatattggccaagtggttgagaagaaatctaagcgtaacagattattttatggt
tgttctcgctatccagaatgtgatttcgtttcatgggaccggccaattggccgagactgt
cctaaggatggccatttcttggttgagaagaaggttaagggcggtcgccgggttgtgtgt
ccgaacggtgattacgaagaagagattcaaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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