KEGG   Leptospira tipperaryensis: A0128_07170
Entry
A0128_07170       CDS       T04558                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
laj  Leptospira tipperaryensis
Pathway
laj02024  Quorum sensing
laj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:laj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A0128_07170
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    A0128_07170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:laj03019]
    A0128_07170
   03036 Chromosome and associated proteins [BR:laj03036]
    A0128_07170
Messenger RNA biogenesis [BR:laj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     A0128_07170
Chromosome and associated proteins [BR:laj03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    A0128_07170
SSDB
Motif
Pfam: Hfq
Other DBs
NCBI-ProteinID: AOP33643
UniProt: A0A1D7UVS1
Position
1:1501814..1502062
AA seq 82 aa
MSAKNNIQDQLLNTARKDKLDLTIYLLNGVPLKGKVVSFDNFTIVLEQENKQSLVYKHAI
STIIPAKIIKLYTEETKDAAQG
NT seq 249 nt   +upstreamnt  +downstreamnt
atgtctgctaaaaacaacatacaagaccaactcttaaacactgcccggaaggataaattg
gatcttaccatttatctattaaacggggttcccttgaaaggtaaggtagtcagctttgat
aattttacgatcgttttggagcaggaaaataaacagagtcttgtttataaacacgcgatc
tcgacgatcattcccgcaaagatcatcaagctttatactgaggaaaccaaagacgcagca
caaggataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system