KEGG   Leptospira tipperaryensis: A0128_15840
Entry
A0128_15840       CDS       T04558                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
laj  Leptospira tipperaryensis
Pathway
laj03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:laj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    A0128_15840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:laj03021]
    A0128_15840
   03400 DNA repair and recombination proteins [BR:laj03400]
    A0128_15840
Enzymes [BR:laj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     A0128_15840
Transcription machinery [BR:laj03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     A0128_15840
DNA repair and recombination proteins [BR:laj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      A0128_15840
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2
Other DBs
NCBI-ProteinID: AOP35183
UniProt: A0A1D7V025
Position
1:complement(3372275..3375955)
AA seq 1226 aa
MYGQVERKRVNFGKITNLDYLPNLIQIQKRSFDWFLQTDVKDETKRKHQGLEAVFRETFP
IESPNNDMIMEYSHYILGEPKRSPQECKDTDATFALPLKAVIRLIIKETGEIREQTVYMG
DLPVMTEQGTFIINGAERVVVSQLHRSPGIFFSYDMERDVFSARVIPYRGSWLEFEMDNK
GILIAKIDRKKKFPATLLIKSLGHGTNEEVLRLFYSSRKEKIAGATSKDLKKILGRRTIN
DIINMETGEVMLEAGSKVNEDNISILKEMKVKEVELIEFPKGKDNPILINALEKDGVNDY
EDAILKFHSLMRQGEPSTIENATTELTRLFFSPKTFDLGDVGRYKINSKFEFNNPKEFSG
EKARVLRPADIIETVRYILNLFSETENYYPDDIDHLGNRRIRSVGELISNQLKTGFSRVE
RVIKERMTVQEIETQTPQLLISIKPITAVINEFFGSSQLSQFMDQTNPLAELTHKRRLNA
LGPGGLSRDRAGMEVRDVHYSHYGRMCPIETPEGPNIGLILSMSSYARVNDYGFLETPYR
TVKNSKVTGQIEHLTADKEEYHYIAQASGVLDEKGELKNKLISTRHRGDFPFRNPSEIQY
MDLAPLQVVSVSTALIPFLEHDDANRALMGSNMQRQAVPLLREEAPFVGTGMETRAAYDS
RICIVNKHDGVVVSVDAENIVVERKGGKESDTYSLTKFKKTNQGTCFNQKPIVGVVHSDY
DGKVSKVSKEKIEVTRDNGDVKEYILQMGSRQYAPIVSSGEEVKRGTTLAGQIVTGEKLD
EIGNILVKGTVLADGPAVDNGVLALGRNVLAAFMPWEGYNFEDAILISERIVRDDVFSSI
HIEEFEIQARETKLGPEQITRDIPNLSDKAFRDLDETGVIRVGAEVKPGDILVGMVTPKG
ETDLTPEYKLLHSIFGEKAKDVRDSSLRMPNGFEGTVIDIKRFSRENQDELPAGVEEMVK
VFVARKRKLLVGDKMAGRHGNKGVVARVMAEEDMPYMEDGTPMDIVLNPLGVPSRMNLGQ
IFETQLGFAASKLGISFETPVFDGAEEVDVDNFCKEANLPLNSKFKLFDGRTGLPFMNEV
FCGYIYILKLAHLVEDKIHARSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGASH
TLQELLTIKSDDMLGRARIYEAIVKGIHSIKPGIPESFNVLVQELRGLALDIIITDSEGN
TVDISDYEDEYSKSKKKIKFETIENA
NT seq 3681 nt   +upstreamnt  +downstreamnt
atgtacggtcaagtagagagaaaacgggtaaatttcggaaaaatcacgaatctggattac
cttcctaacttgattcaaattcagaagcgttcttttgactggtttcttcagacagacgtt
aaggatgaaaccaaaagaaagcatcaaggattagaagctgtattccgggagacctttcct
attgaaagtcccaacaatgacatgatcatggagtacagtcattatattctgggagaacca
aaacgttctcctcaagaatgtaaagacacggacgcgacttttgcgcttccgttaaaagca
gtcatcaggttaatcatcaaagaaaccggagaaatccgcgaacaaaccgtctacatggga
gatcttcccgtgatgaccgagcagggaacgtttatcatcaacggagcggaacgcgtcgtc
gtttctcagcttcaccgttctcccggtattttcttttcttacgatatggaaagagacgtt
ttctcagccagagtgattccttacagaggatcctggttggaattcgagatggacaacaag
ggaattctgatcgcgaagatcgatagaaagaaaaaattcccggctactcttcttatcaaa
tcactcggccacggaaccaacgaagaagttcttcgtttattctacagctctagaaaagaa
aaaatcgcaggcgctacttccaaggatctgaaaaaaattctcggaagaagaaccatcaac
gatatcatcaacatggaaaccggagaggtcatgctcgaagccggttccaaggtcaacgaa
gacaatatctccatcttaaaagagatgaaggtaaaagaagtcgaactgatcgaatttcca
aaaggaaaagataacccgattttgatcaacgctcttgaaaaagacggagtgaacgactac
gaggatgcgattttaaaatttcattctttgatgcgtcagggtgaaccttctacgattgag
aatgctactaccgaattgactcgtcttttcttttctccaaaaactttcgatctcggagac
gtgggtcgttacaaaatcaattctaagtttgaatttaataacccgaaagaattttccggt
gaaaaggctcgcgtcttaagaccggcggacatcatcgaaaccgttcgttacattctgaat
cttttttctgaaactgaaaactattatccggacgatatcgatcaccttggaaacagaagg
attcgttccgttggagagttgatctccaaccaactcaagaccggattctccagagtggaa
agagtgatcaaagaaagaatgaccgttcaggaaattgaaacccaaactcctcaacttctc
atttcgatcaaaccgatcacggccgtgatcaacgaatttttcggttcttctcaactttct
cagtttatggatcagacaaaccctctcgcggaactgactcacaaacgaagactgaacgca
cttggtcccggaggtctttcgagagacagagccggtatggaagtgcgggacgttcactat
tctcactacggtagaatgtgtccgattgaaactccggaaggtccgaacatcggtctgatt
ctttctatgtcttcgtatgctcgtgtaaacgactacggattcttagaaactccttacaga
acggttaagaattctaaagtcaccggtcagattgaacaccttaccgcagacaaagaagaa
tatcattatatcgcacaagcatctggcgttctcgacgagaaaggagaactcaaaaacaaa
ttgatctccacccgtcacagaggggactttcctttccgtaacccgagtgaaatccagtat
atggacttggctcctcttcaagttgtttcggtttctacggcgctcattcctttcttggaa
cacgacgacgcgaaccgcgccttgatgggttccaacatgcaacgtcaggcagttcctctt
cttcgtgaagaagctcctttcgtcggaactggaatggaaaccagagccgcttatgactcc
agaatttgtatcgtgaacaaacacgacggcgttgtggtttccgtggatgcggagaatatc
gtcgtcgagagaaagggcggaaaagaatccgatacttattctcttacaaaattcaaaaag
accaaccaaggaacttgttttaatcaaaagccgatcgtcggagtggttcactccgattac
gacggaaaagtatccaaggtttctaaagaaaaaatcgaagtaacacgggataacggagat
gtaaaagaatacattctccagatgggaagcagacaatatgctccgatcgtttcttccggt
gaagaagtaaaaagaggaaccactctcgcgggacaaatcgttaccggtgagaagttggac
gagatcggaaatatcctcgtgaaaggaacggtccttgccgatggtcctgccgttgacaac
ggagtgctcgctcttggtagaaacgttctcgcggcgttcatgccttgggaaggttacaac
ttcgaggatgcgattttgatctccgaaagaatcgttcgcgacgacgtattctcttccatt
cacatcgaagagttcgagatccaagcaagagaaacaaaacttggaccggaacaaatcact
cgagacattccaaatctttcggacaaagcgttccgtgatttggatgaaaccggtgtgatc
cgcgtcggtgcggaagtgaaaccgggagacattctcgtgggaatggtgactccgaaaggc
gaaaccgacctgactccggaatacaaacttcttcattctatctttggtgaaaaagccaaa
gacgtaagagattcttctcttagaatgccgaacggttttgaaggaaccgtcattgatatc
aaaagattctctcgcgagaatcaagacgaacttcctgcgggcgtggaagaaatggtaaaa
gtattcgtagccagaaagagaaaacttctggttggggataaaatggccggacgccacgga
aacaaaggggtcgtcgctcgtgtaatggcggaagaagacatgccttacatggaagacgga
actccgatggacatcgtcttaaacccgttaggcgttccttcacggatgaacctcggtcag
atttttgaaactcagttgggttttgccgcgagcaaactcggaatttcttttgaaactccg
gtctttgacggcgcggaagaagtcgacgtggataatttctgcaaagaggcaaatcttcct
ctgaattctaaattcaaactttttgacggtagaaccggacttccttttatgaacgaagtc
ttctgcggttatatctacatcttaaaactcgctcacttggtggaagacaagatccacgca
agatcgaccggtccttactctttggtgactcaacaaccactcggaggaaaggctcagttc
ggtggacagcgtcttggggaaatggaagtgtgggctctcgaagcttacggcgcttctcat
actcttcaggaacttctcaccatcaagtccgacgatatgctcggacgtgcgagaatctac
gaagcgatcgtcaagggtatccattccatcaaacctggtatccctgagtccttcaacgta
ttggttcaagagcttagagggcttgctctggatatcatcatcaccgactcggaaggaaac
actgtggatatttccgactacgaagatgaatattctaagagtaagaagaaaattaaattc
gagactatagagaacgcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system