KEGG   Lingula anatina: 106160881
Entry
106160881         CDS       T04921                                 
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
  KO
K12815  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:5.6.2.6]
Organism
lak  Lingula anatina
Pathway
lak03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lak00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106160881
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lak03041]
    106160881
Enzymes [BR:lak01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     106160881
Spliceosome [BR:lak03041]
 Complex C
  Other components
   Step II factors
    106160881
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C HA2_N DEAD Flavi_DEAD
Other DBs
NCBI-GeneID: 106160881
NCBI-ProteinID: XP_013393104
UniProt: A0A1S3I6W3
Position
Unknown
AA seq 648 aa
MVGCTQPRRVAAMSVAKRVSEEMGSKLGDEVGYAIRFEDCTSEKTIIKYMTDGILLRESL
RESDLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRQDLKLIVTSATMDATKFSTFFGN
VPVYIIPGRTFPVDIFFSKNTVEDYVDAAVKQALQVHLMGNPGDILIFMPGQEDIEVTCE
LLAERLDELDEAPPLAILPIYSQLPSDLQAKIFQKAPDGIRKAVVATNIAETSLTVDGIQ
FVVDAGFCKLKVFNPKIGMDALSVFPISQANANQRSGRAGRTGPGQCFRLYTERQYKDEL
LVTTVPEIQRTNLANVVLLLKSLGVQNLLQFHFMDPPPQDNILNSMYQLWVLGALDNTGS
LTSLGRQMVEFPLDPALSKMLIVSCDMGCSADILIIVSMLSVPAIFFRPKGREEDSDSAR
EKFQVPESDHLTFLNVYLQWKRNNYSSSWCQEHFVHVKAMRKVREVRQQLKEIMDQQKMD
FVSCGQEWDIIRKCICSSYFHQAARMKGLGEYVNMRTGMPCHLHPTSALFGMGYTPDYIV
YHELIMTSKEYMQCVTAVDGHWLAELGPMFYSVKESSKTRNENRQKEAADMTAMEEEMKK
AEEQIKLRKEEQEKALVDTSKRNQIVTPGRKEPGTPFTPRRPRSKIGI
NT seq 1947 nt   +upstreamnt  +downstreamnt
atggtgggctgcacacaacctcgtcgagtggcggccatgtctgtcgccaaacgagtctcg
gaagagatggggagtaagctcggggatgaagtggggtatgctattcgatttgaggattgt
acctcggagaaaacaattatcaagtacatgacagatggtatactgctgagagaatcactg
cgtgagtctgacctagataactacagtgcaatcatcatggatgaagctcacgaacggtca
ctaaatactgatgtcttgtttggtttactgagggaggttgttgctaggcgacaggatctc
aagttaatcgtcacctcagcaaccatggatgccaccaaattctccaccttcttcggcaac
gtcccggtgtacataatacctggcaggacattccctgtggacatcttctttagcaagaac
acggtggaggactatgtggatgcagcagtcaagcaggccttgcaggtccacctgatgggc
aacccaggtgacatattgatcttcatgccaggccaggaggacattgaggtgacatgtgaa
ctgctggcagagcgtcttgatgagcttgacgaggcgcccccactggctatcttgcccatc
tactcccagctgcccagtgatctccaggccaagatctttcagaaggccccagatgggatc
aggaaagctgtggtggccaccaatatagccgagacctccctcacagtggatggtatacag
tttgtggtagatgctggtttctgcaagctgaaggtgttcaaccctaagattggtatggat
gctctctctgtgttccctattagtcaggccaatgccaaccagaggtcagggagagcagga
agaacaggccctggccagtgcttcaggctgtacacagagcgccaatacaaggacgagttg
ctggtgactacagtgccagagatccagagaaccaacctggccaacgtggtgctcctgctc
aagtccctaggggtgcagaatctcctccagttccacttcatggatccacctccacaggat
aacatcctgaactccatgtaccagctgtgggttctgggagctctggacaacacgggttcc
ctgacgtccctgggaagacaaatggtggagttccctctggaccccgcgctgtccaagatg
ttgattgtctcctgtgatatgggctgcagtgcagatatactgatcatagtgtccatgtta
tctgtcccagccattttcttcagaccaaaaggaagagaagaagactcagattctgccaga
gaaaagtttcaggttccagagagtgaccatttgacctttcttaatgtctatctacagtgg
aagagaaataactattcctccagctggtgtcaggaacattttgtccatgtcaaggcaatg
aggaaggtccgtgaggtgcgtcaacagctgaaggagataatggaccagcagaagatggac
ttcgtgtcctgtggccaggagtgggatatcatcaggaagtgtatctgttcatcctacttc
caccaggcagccaggatgaagggtcttggtgaatatgtcaacatgaggacagggatgccc
tgtcacctacaccccaccagtgcactgtttggcatgggttatactccagactacatagtc
taccatgaactgatcatgacatccaaggaatacatgcagtgtgtgactgctgtggatgga
cactggctagctgaactgggaccaatgttttatagtgtcaaagaatcatcgaagacaaga
aatgaaaaccgccagaaggaagcagcggacatgactgccatggaggaagagatgaagaaa
gccgaggagcagattaagttaagaaaggaggagcaagagaaggctttggttgatacgagc
aaaaggaaccaaattgtcaccccaggaaggaaagaaccaggcactccatttacccccaga
agaccaaggtccaagataggaatttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (116)   
   KEGG ORTHOLOGY (1)   
   RefGene (112)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (130)   

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