KEGG   Lingula anatina: 106172743
Entry
106172743         CDS       T04921                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
lak  Lingula anatina
Pathway
lak03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lak00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106172743
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lak03021]
    106172743
Enzymes [BR:lak01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     106172743
Transcription machinery [BR:lak03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     106172743
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 106172743
NCBI-ProteinID: XP_023932400
UniProt: A0A2R2MQ79
Position
Unknown
AA seq 1752 aa
MEPKDFSPFLTHGITFGTYTDDEILGLSVKELTNPQSFDSLQHPTSGGLYDPALGPQDRD
DQCETCGQMSQWCPGHMGHISLPLPVYNPVFFKNLFQILKGTCFSCNRLLARGAQCSLIT
HQLTALDHGLLHIVGEMQDLYSNVLNEQGTDIGMEDTIQRQLEECLQSALGVNIENGNSY
QVKHITEMKQQLIKQFLKDHLIPKGKICGHCKMPVKPMRSEHNTKIFFQKGLDRKSAREM
IEKKNRQKQQRKQALQEGNSEYLEDEVVEMEDEKNEPSEDLNEKEVSAISEQLYLTPMEA
RSHIRKVWSNDKAVFMKLFGALIMKNSHKYPTDIFFLDVVPVAPNRFRPMAVMKERKYEH
PQSGNLCKVLLDAITIRQILADIQRSEKEGADITRSEEETTLLESVPGKSLTEKLQNVWV
RMQTHVNCVVDSELDKMSTDKHPGIKQLLEKKEGLFRKHMMGKRVNYAARSVISPDPYIN
TDEIGIPMVFALKLTYPQPVTPWNVQELRQAVINGPRQHPGAVFVENEDGTRIMLNPTDV
RQREAIAKELLTPSTFYHGPPESKKVLRHLKNGDVLLLNRQPTLHRPSIQAHKARVLPAE
KTLRLHYANCKAYNADFDGDEMNAHFVQDEIARAEAYTIASTNFQYLVPKDGTPLAGLIQ
DHMVSGVMLTMRGRFFSRGDYQQLVYAALTDKYGPVKMLRPGMIKPVKLWSGKQVLSTVL
LNLIPEGKPALNLHGKAKIAGKNWLAGQPRAWLAGGQALKDESMSESEVVIRSGELLCGV
LDKGHYGPTPYGLVHCCYELYGGVVACKLLTSLAKLFTTFLQQHGFTLGPEDILVTPQAD
VKRKKNVDASRLCGDEAAAKAMGVDSPDDTKTLLQKLEKAHYNRDGRHMMELDLAMKQKT
DEYQNNIAKVCIPHGLQKIFPNNNLQLMVQSGAKGSSVNCMQISCLLGQIELEGRRPPLM
LSGRSLPSFLPYDTSPRAGGFVDGRFLTGIRPQEYFYHCMAGREGLIDTAVKTSRSGYLQ
RCIIKHLEGIMVNYDMSVRDSDGSVVQFQYGEDSLDILKTPFLNKKQFPFLISNQNVVLN
ETELKRTESIVDTTTAGTLHRKLKKWHKKNPSSSKTRTSGFLSYSQKVWGSITEQHPDTE
LGSHGRSKATEAVCAAWRQLEEKKKRKLEKRHSCCPDPVAADLSPARYFGSLSERMLETM
DEYIKTNPDNLLVDDTETPVTPGHISTDRFKTMLFSRTMNCLAEPGEAVGLLAAQSIGEP
STQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPNMDIPILNTEYAKKKAKPLQ
LKLNKVVLAQVLEDVKVCEYLAVKNKVDKSRMYRLTFKFLPYETYKKDFCVTPNKVLSYM
EKKFIRHLCDAVKKRILELSKAKMVSTATVVERKRPQTENEPVNNTANEEDDLASDDDLN
DGDAAAVKERERQMQERDYQGEEEEKEEVGEEEEESDEDLEDEDWSIDGSSIGQSESDMS
RPVTPEPGLASSKVSKKKSKKKKRKVEMDEIRVNAVLCSHQWVHSYTYDADSEEKCQVTL
KLALSDTRFDMASLIESEARRAVVHQVQGITRAILGEVKTPGQEGTHLRTEGVNIVEMYQ
YDRVLDLDRLYTNDIHAIAETYGIEAAARAILKECRDVFAAYGIQVDYRHLSLIADYMTF
EGSYKPFNRMGIESNSSPLQKMSFETTMHFLKQTTISGSKDDLKSPSARLVVGRVVDVGT
GSFGLRQPLIVS
NT seq 5259 nt   +upstreamnt  +downstreamnt
atggaaccaaaagacttctctcccttcctaacacatggtatcacgtttggcacctacact
gatgacgagattttaggtctgagtgtgaaggagttgaccaacccccagtcatttgattcc
ctgcaacaccctaccagtggcggactgtacgatccagctctcggtccacaagacagagat
gaccagtgtgagacctgtggtcagatgagccagtggtgtccaggccacatgggacatata
tccttgccattacctgtgtataaccctgtgttctttaagaacctattccagattctgaaa
ggcacatgcttttcttgtaacagattgcttgccaggggtgcccaatgttctcttatcacc
caccagctgactgctttagatcatgggttactgcacattgtaggggagatgcaggacttg
tattctaatgtactgaatgaacagggaacagatataggcatggaggatacgatacagaga
cagctggaagagtgcctccagtcggcactcggagtgaacatagaaaatggtaactcctat
caagtgaaacacatcactgaaatgaagcagcaactaatcaaacaatttctcaaggaccac
cttataccaaaaggcaaaatatgtggacactgcaagatgccagtgaagcctatgcgatca
gaacacaacacaaaaatctttttccagaaaggactagatagaaaaagtgccagggaaatg
attgagaagaaaaacagacagaaacagcaaagaaagcaagccctgcaggagggtaattct
gaatacttggaagatgaagtagtcgaaatggaagatgaaaagaatgagccttcagaagat
ttaaatgaaaaggaagtgtctgcaatcagcgaacagctgtacttgacacctatggaggca
cgcagtcacatacgaaaagtgtggagtaatgataaggcagttttcatgaaactgtttggg
gctttaattatgaaaaactcacacaaatacccaacagatatcttcttcttggatgttgtg
cctgtagcaccaaacagatttaggccgatggctgtgatgaaagagagaaaatatgaacat
ccccagtcagggaatctttgtaaagttctcctagatgccattactatacgtcagatattg
gcagatattcagaggtcagagaaagaaggtgctgatataacacgctctgaagaagaaacg
actcttcttgaaagtgttcctgggaaaagtctgacagaaaagctacagaatgtctgggtc
aggatgcaaacccacgtgaactgtgtagtggacagtgaattagataaaatgtccactgat
aaacacccaggaataaaacagttacttgagaagaaggagggtctgtttaggaagcacatg
atggggaagagggtgaactatgctgctagatccgtcatctcaccagacccttatattaac
accgatgagatagggataccgatggtgtttgctcttaaactgacctatcctcagccggtc
actccttggaatgtccaagagctgaggcaagctgtcatcaatggaccaaggcaacatcct
ggtgctgtatttgttgagaatgaagatggcaccaggatcatgttgaaccccacagatgtc
agacagagggaagccatagccaaagaactgctgacaccaagcacattttatcatggaccc
ccagagagcaagaaggtgctacggcatttaaagaatggagatgttctgttgttaaacagg
cagccaactcttcatagaccaagtatacaggcacacaaggcccgtgtgttgccagcggag
aaaacattacgtcttcattatgccaactgtaaggcctacaatgctgactttgatggagat
gaaatgaatgctcactttgtccaagatgagatagccagggctgaggcttacacaatagcc
agcaccaacttccagtacttggtccccaaagacgggacaccacttgctggcctgattcaa
gatcacatggtctctggtgtgatgcttactatgagagggcggttctttagcagaggggac
taccagcagcttgtatatgccgcacttacagataaatatggaccagtgaagatgctgaga
ccagggatgataaagccagtgaaattgtggtcaggaaaacaagtcctctctactgtgctg
ctgaacctgattcctgaaggcaaaccagctttgaacctgcatggcaaagcaaagatagcc
ggcaagaactggttagctggtcagccaagggcatggttggccggaggacaagccctgaag
gatgagtccatgagtgaatctgaggtggtcatccggtcaggagaactgctgtgtggggta
ctggacaaggggcactatggacccacaccatatggtttagtgcactgttgctatgagcta
tatggaggagtagtggcctgcaaactgttgacaagtttagccaaactctttacaaccttt
cttcagcaacatgggttcactttaggccctgaggatattttggtgaccccacaggctgac
gtgaagagaaagaagaatgtggatgcctctcggctgtgtggggatgaggcagcagccaaa
gccatgggtgtagattccccagacgacactaaaaccctgctgcagaagttagagaaagca
cattacaacagagatggccgccacatgatggagctagacctggccatgaagcagaaaaca
gatgaatatcagaataacatagcaaaagtttgtataccacatgggctacagaaaatattt
ccaaataataatttacagttaatggtccagtctggtgctaaagggtcatcagtgaactgt
atgcagatctcctgccttctaggtcagatagaactggaaggtcgtcgaccccctctcatg
ctcagtggaaggtcattgccctcttttcttccctatgacacatcccccagggcgggaggg
tttgtggacggcaggtttcttacagggatcagacctcaggaatatttctatcattgtatg
gcaggcagagagggtttgatagacacagctgtgaagaccagcagaagtggctacttacag
agatgtatcatcaaacatctggagggtattatggtcaactatgatatgtcagtgagggac
agtgacggcagcgtggtccagtttcaatatggtgaagacagcttggacattctgaaaaca
ccattcttaaacaagaaacagtttcccttcctaataagcaaccagaatgttgtccttaat
gagacagagttgaagagaacagaaagcattgtggacactaccacagctggaacactgcac
agaaagctcaaaaagtggcacaaaaagaaccccagttcatccaagacaaggacatctgga
ttccttagctacagtcagaaggtgtggggttctatcactgagcagcacccagacactgag
ctgggaagtcatgggagaagtaaagccactgaggctgtatgtgcagcatggaggcagctt
gaggagaaaaagaaaagaaagttagagaaacgccactcttgctgcccagaccctgtggca
gctgaccttagccctgcacgatattttggatctctttctgaaaggatgcttgaaacaatg
gatgaatatatcaagacaaatcctgataatttgttggtagatgacactgagactccggtc
actcctgggcacatctctactgaccggttcaagacaatgctcttctcaagaactatgaac
tgtctagctgagccgggggaagctgtagggttacttgctgctcagtctattggagagcct
tccacacagatgacactgaatacttttcactttgctgggcgtggtgaaatgaacgtaact
ctgggtattcctcgactgcgtgaaatcctcatggttgctagtgccaatataaagacccca
aacatggacatccccatcctcaacactgaatatgctaaaaagaaagccaaaccactgcag
ctcaagttgaacaaggttgttttggctcaggtgcttgaagatgtaaaagtgtgtgaatat
ttggctgtgaaaaataaggtagataaaagcaggatgtacaggctgacttttaagtttcta
ccatatgaaacctacaaaaaggacttctgtgtcaccccgaacaaggtgctgtcttacatg
gaaaagaaattcatcagacatctgtgtgatgctgtgaaaaagagaatcttggaactgtca
aaggcaaaaatggtaagtactgccacagtagtagagagaaaaagacctcagacagaaaat
gagcctgttaacaacactgccaatgaggaggatgatctggcatctgatgatgacttgaat
gatggggatgctgctgcagtgaaggaaagggagagacagatgcaggagagagattatcag
ggagaagaggaggagaaggaagaggttggggaagaggaggaagaatcagatgaagacctt
gaagatgaagactggtctatagatggcagtagtatcggtcagtcagagtcagacatgtcc
aggccggtgactccagaacctggacttgcctcttccaaagtatcaaagaaaaagagtaaa
aagaagaaaaggaaagtggaaatggatgaaatcagagtgaatgctgtgttatgcagtcac
cagtgggtacacagttatacctatgatgcagacagtgaagagaagtgtcaggtcacactc
aagcttgccctctcagacaccaggtttgacatggcctctctgatagagagtgaggccagg
cgagcagtggttcaccaggttcaggggatcaccagggcaatcctgggggaggtgaaaaca
ccagggcaagaaggaacacacctcaggacagagggggttaatattgtggaaatgtaccag
tatgaccgtgtccttgaccttgacagactgtacaccaatgatatccatgctatagcagag
acgtatggtatagaagctgcagccagggctattttaaaggaatgcagagatgtgtttgct
gcctatggcattcaggtagactatcgacacctctcccttatagcagactatatgaccttt
gaaggaagttataagcctttcaatagaatgggaattgaatccaactcctcgccattgcag
aaaatgagcttcgaaaccaccatgcattttctcaaacaaaccaccatctcaggttccaag
gatgatttgaagtctccgtctgcccgtctggtagtaggcagagtggtggatgtgggtaca
ggaagctttggactgagacaaccactcatagtatcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (77)   
   KEGG ORTHOLOGY (1)   
   RefGene (73)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (91)   

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