KEGG   Lacimicrobium alkaliphilum: AT746_02300
Entry
AT746_02300       CDS       T04189                                 
Name
(GenBank) poly(A) polymerase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
lal  Lacimicrobium alkaliphilum
Pathway
lal03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AT746_02300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lal03019]
    AT746_02300
Enzymes [BR:lal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     AT746_02300
Messenger RNA biogenesis [BR:lal03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     AT746_02300
SSDB
Motif
Pfam: PolyA_pol_arg_C PolyA_pol PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: ALT00281
UniProt: A0A0U3B4X7
Position
485891..487180
AA seq 429 aa
MPRAEHDVSRKDISDNALKVLYRLHNAGYQAYLVGGCVRDLLLGLHPKDFDVATDAEPEQ
IKALFRNCRLIGRRFRLAHIVFGRDVIEVATFRGHHDSEEQGASDKLSRRSDEGLLLRDN
VFGSIEEDAERRDFTANAMYYNIADFSITDFANGMQSLKERKLHLIGDPETRYREDPVRM
LRAVRFAAKLDMQISSEAGDIIPRLAPLLANIPPARLFEEVLKLFLAGRAEQTFDLLQEY
GLFGQLFPMLQPMLKVADSKENLFVRQVLINTDDRINNDQRVTPAFIYAAMLWYPMEQRF
DELMAESGLSPHDAFNMAINDVLQAQQKRIMIPKRFSMPIRDIWVLQQRLPKRFGRRAFQ
LLDHPKFRAGYDFLLLRASVEGGELEELGKWWTDFQDASGDERTSMLAQLKGSTKGKGRR
RPRKRKPQQ
NT seq 1290 nt   +upstreamnt  +downstreamnt
atccccagggcagagcatgatgtttcccgcaaggatatcagtgataatgccctgaaggtg
ctgtatcgcttacataatgccgggtatcaggcctatctggtgggtggctgtgttcgcgat
ttgctgctcggtttacatcctaaggactttgatgtggccaccgatgctgagcctgagcag
attaaggccttgtttcgtaattgccgtctgattggtcgccgttttcgcctggcgcacatt
gtgtttggccgcgatgtcatcgaagtggccactttccgcggccatcacgacagtgaagag
cagggcgccagtgacaaactcagtcgccgctcagacgaagggcttttattgcgtgataat
gtgtttggcagcattgaggaagacgccgaacggcgcgatttcactgctaacgccatgtat
tacaatattgccgatttcagtatcaccgattttgccaatggcatgcagtcacttaaggag
cgcaagctgcacctgataggcgatcctgagacccgctatcgagaggatccggtgcggatg
ctgcgggcggtgcgttttgcggcaaagctggatatgcagatttcctccgaggcgggagac
attattccccggctggcgccgttgttggccaatattcccccggccagactgtttgaagaa
gtgctaaaactctttctggccggccgcgccgaacaaaccttcgatttgctgcaggaatac
ggtctgttcggtcagttgttcccgatgctgcagcccatgctcaaggtggctgacagtaaa
gaaaacctgtttgtgcgccaggtgctgatcaatactgatgacagaatcaataacgatcaa
cgggttactccggcatttatttatgccgccatgctctggtatccgatggagcagcgtttt
gatgagctgatggccgaaagtggtctgagccctcatgacgcctttaatatggctatcaat
gacgtgttacaggcacaacagaagcgcatcatgatccctaagcgtttcagtatgccgatc
cgtgatatctgggtattgcaacagcgcctgcccaagcgtttcggacgccgtgcctttcag
cttcttgaccatccgaaatttcgtgccggttatgattttctgttgttacgggccagtgtt
gaagggggtgaacttgaagagctgggtaaatggtggacagactttcaggatgccagtggt
gatgagcgcacgagtatgctggcgcagcttaaaggctccacaaaaggtaagggtcgccgc
cgtccgcgcaaacggaaacctcagcagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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