KEGG   Companilactobacillus alimentarius: LA20249_02385
Entry
LA20249_02385     CDS       T05458                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
lali  Companilactobacillus alimentarius
Brite
KEGG Orthology (KO) [BR:lali00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lali03032]
    LA20249_02385
   03036 Chromosome and associated proteins [BR:lali03036]
    LA20249_02385
   03400 DNA repair and recombination proteins [BR:lali03400]
    LA20249_02385
DNA replication proteins [BR:lali03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    LA20249_02385
Chromosome and associated proteins [BR:lali03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    LA20249_02385
DNA repair and recombination proteins [BR:lali03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      LA20249_02385
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 DUF2267 HU-CCDC81_euk_1 HU-CCDC81_euk_2 DUF2780
Other DBs
NCBI-ProteinID: AUI71115
UniProt: A0A2K9HK11
Position
475956..476231
AA seq 91 aa
MANKAELIDSVASKTGLTKKDATSAVDAVFETIQDNLSEGNKVQLIGFGNFEVRQRAARK
GRNPQTGEEIKIPASKVPAFKPGKALKDSVK
NT seq 276 nt   +upstreamnt  +downstreamnt
atggcaaataaagctgaacttattgatagtgtagcaagcaaaactggcttgacaaagaag
gatgcaacttctgctgttgatgcagttttcgaaacaatccaagacaacttatcagaagga
aacaaagttcaattgatcggctttggtaactttgaagttcgtcaacgtgctgctcgtaag
ggtcgcaacccacaaactggtgaagaaattaagattccagcaagcaaagtacctgcattt
aaaccaggtaaggctttgaaggattcagttaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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