KEGG   Lacinutrix sp. 5H-3-7-4: Lacal_0686
Entry
Lacal_0686        CDS       T01533                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
lan  Lacinutrix sp. 5H-3-7-4
Pathway
lan03030  DNA replication
lan03410  Base excision repair
lan03420  Nucleotide excision repair
lan03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Lacal_0686
   03410 Base excision repair
    Lacal_0686
   03420 Nucleotide excision repair
    Lacal_0686
   03440 Homologous recombination
    Lacal_0686
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lan03032]
    Lacal_0686
   03400 DNA repair and recombination proteins [BR:lan03400]
    Lacal_0686
Enzymes [BR:lan01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Lacal_0686
DNA replication proteins [BR:lan03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Lacal_0686
DNA repair and recombination proteins [BR:lan03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     Lacal_0686
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Lacal_0686
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH_2 RNase_H_2 HHH_5
Other DBs
NCBI-ProteinID: AEH00536
UniProt: F6GE21
Position
779851..782712
AA seq 953 aa
MSDNKRVFLVDAYALIFRGYYAFIKNPRINSKGQDTSAIMGFMNSLLDVIKRERPNLLAV
CFDKGGSTDRVEMFEEYKANRDETPEGIKTAIPYICQILEAMHIPIMVKEGFEADDVIGT
LAKQAEKEGYQTFMVTPDKDFAQLVSENIFMYRPVFGGGYETWGIPEVQKKFEVTDPLQV
IDYLGMMGDASDNIPGLPGVGDKTAKKFLAAYGSMENLFANTHELKGKMKEKIEANQELG
LLSKKLATIMLDVPVEFHAKDFELDAPDIDKVKEIFQELEFRRLTDNFIKTFAEDSPAIG
NSTSNTSEKPTSKTSTAPTSNAGAGQFNLFGGDPNETKDGTSNIDTAFTRRTVANTSHFY
QSVAPGMATKLFIKNLMNQTSVCFDTETTGLNPLTAELVGIAFSWETGKGFYLPFPEDKQ
EAQAIIEALRCFFEAENIQKIGQNLKYDIKVLAKYNVEVKGPLFDTMLAHYLINPDMRHN
MDVLAETYLNYTPVSITELIGKKGKNQLSMRDVPLDKQTEYAVEDADITLQLKEHFEKEL
GEANTQKLFDDIEVPLLRVLAAMELEGINLDKDFLQSLSNDLNRDIEALVTKIYDVAGEE
FNIASPKQLGIILFEKLKLVDKPKKTKTGQYKTGEDILSVLAKDHEIIRNILEYRGLAKL
KSTYVDALPLQVEESTGRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQVRKAFIPR
NDDYTLLAADYSQIELRIIAALSKEETMIEAFKNGEDIHASTASKVFGVPIEEVTRAQRS
NAKTVNFGIIYGVSAFGLSNQTDLSRGEAKELIDTYYETYPKLKKYMSEQVHFARDNGYV
KTILDRRRYLKDINSRNAVVRGAAERNAVNAPIQGSAADIIKIAMINIYNKLEAGNYKTK
MLLQVHDELVFDVYKPELEKMTTLIKTEMENAFKMEVPLDVEVDTGLNWLEAH
NT seq 2862 nt   +upstreamnt  +downstreamnt
atgtcagacaataaacgcgtctttttagtagacgcatacgccttaatatttcgtggctat
tatgcctttataaaaaatccaagaattaacagtaaaggtcaagacacctcagctattatg
ggttttatgaactcacttttagacgttattaaacgcgaaagaccaaaccttttagctgtt
tgttttgataaaggcggcagtactgatcgagtagaaatgtttgaagaatacaaagccaat
agagacgaaacgcccgaaggtataaaaacagctattccatacatttgccaaattttagaa
gccatgcatattcctatcatggttaaagaaggttttgaagcagacgatgttattggaact
ttagcaaaacaagccgaaaaagaaggctaccaaacttttatggtaacaccagataaagat
tttgcacaattagtaagcgaaaatatttttatgtacagacctgtttttggtggtggctat
gaaacttggggaataccagaagtacagaaaaaatttgaagttacagatccattacaagtt
atcgactatttaggtatgatgggagatgcaagtgataatattccaggattaccaggtgtt
ggtgataaaacagcaaaaaagtttttggccgcttatggtagtatggaaaacttatttgcc
aatacgcatgagcttaaaggtaaaatgaaagaaaaaattgaagccaaccaagaattgggt
ttactttctaaaaaactagccacaattatgcttgacgttcctgtagagtttcatgctaaa
gatttcgagttagatgcaccagatatagataaagtaaaagaaatttttcaagaattagag
tttagacgtcttacagataattttataaaaacttttgctgaagattcgcctgcaatagga
aatagcacttcaaatacttcagaaaaaccaacttcaaaaacaagcacagcaccaacctct
aatgctggagctggacaatttaatttatttggtggcgatccaaatgaaacaaaagatgga
acctctaatatagacactgcttttacaagaagaaccgttgcaaacacgtctcatttttac
caaagtgtcgctccaggaatggctaccaaactattcattaaaaatttaatgaatcaaact
agtgtgtgttttgatacagaaactacaggcttaaatccattaactgcagaattagttggt
atcgctttttcttgggaaacaggaaaaggattttatttacctttcccagaagataaacag
gaagcacaagccattatcgaagcattacgatgcttttttgaagcagaaaacattcagaaa
attggtcagaatttaaaatacgatatcaaagtattagcaaaatataacgtagaagttaaa
ggtccattatttgataccatgttagcgcattatttaattaatccagacatgcgtcataat
atggatgtgttagcagaaacctatttaaattacacaccagtttctataacagaactcatt
ggcaaaaaaggcaaaaaccaattgtctatgcgcgatgttccgttagacaaacaaacggaa
tatgctgtcgaagatgcagatattaccttacaacttaaggagcattttgaaaaagaatta
ggcgaagccaatacacaaaagctttttgatgatatcgaagtgcctttactgcgtgtatta
gcagcaatggaactagaaggcattaacttagataaagactttttacaatcattatctaac
gatttaaacagagacattgaagctttagtaaccaaaatttacgatgttgctggcgaagaa
tttaatattgcttcaccaaagcaattaggaatcattttatttgaaaaattaaagcttgtc
gataaacctaaaaaaaccaaaacaggacaatacaaaacgggtgaagacattctatctgta
ttagccaaagatcatgagattattcgtaatattttagaatatcgtggtctggcaaaatta
aaaagtacctatgttgatgctttacctttacaagtggaagaatctacaggtcgcgtacat
acagattatatgcaaaccgttgctgcaacaggacgcttaagtagtaacaatcctaactta
caaaatattccaattcgtacagaacgtgggcgccaagtacgtaaagcgtttattcctaga
aatgacgattacactttacttgctgccgattatagccaaatagaactgcgtattattgca
gctttaagtaaagaggaaaccatgattgaagcctttaaaaatggtgaagatattcacgct
tcaaccgcttccaaagtttttggagtgccaattgaagaggtaaccagagcgcaacgtagc
aatgccaaaaccgtaaactttggtattatttatggcgtgtctgcttttggcttaagtaac
caaaccgatttatcgcgtggtgaagccaaagagcttattgatacctattacgaaacctat
ccaaagcttaaaaaatacatgagcgaacaagtccattttgctcgcgataacggttatgta
aaaaccattttagacagacgccgttacctaaaagatataaatagccgaaacgctgtagtt
cgcggtgcagcagaacgaaatgcggttaatgcaccaatacaaggtagtgctgcagatatt
ataaaaattgctatgattaatatttataataaattggaagctggtaattataaaaccaaa
atgctactacaagtacatgatgaattggtttttgatgtctacaaaccagaactcgaaaag
atgacaaccttaattaaaaccgaaatggaaaacgcctttaaaatggaagtgccattagat
gttgaggtagatactggtttgaattggttggaggcgcattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (44)   

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