KEGG   Lupinus angustifolius (narrow-leaved blue lupine): 109344304
Entry
109344304         CDS       T04664                                 
Name
(RefSeq) RNA polymerase II transcription factor B subunit 4
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
lang  Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03022  Basal transcription factors
lang03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lang00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    109344304
  09124 Replication and repair
   03420 Nucleotide excision repair
    109344304
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lang03021]
    109344304
   03400 DNA repair and recombination proteins [BR:lang03400]
    109344304
Transcription machinery [BR:lang03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     109344304
DNA repair and recombination proteins [BR:lang03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     109344304
SSDB
Motif
Pfam: Tfb4 RNA_POL_M_15KD
Other DBs
NCBI-GeneID: 109344304
NCBI-ProteinID: XP_019438573
Position
LG03:complement(27528548..27534593)
AA seq 295 aa
MPSAPSKLYADDVSLLVVTLDTNPFFWSTFSVPFSDFLSQVLAFLNSILLLSQLNQLVVI
ATGCNSCGYVYDSASSKNLVSPTASMPALYSNLLHNLEQFVARDQKLAKPDHDTRGIVPA
SLLSGALSMALCYIQRAFRSGSMHPQPRILCLQGSADGPEQYVAIMNAIFSAQRSTVPID
SCYIGSNNSAFLQQASYITGGIYYKPPQLDGLFQYLSTVFATDLHSRAFLRLPKSLGVDF
RASCFCHKQTIDMGYVCSVCLSIFCERHDKCSTCGSVFGQAKQDVTSANTKKRKA
NT seq 888 nt   +upstreamnt  +downstreamnt
atgccttccgctccttcaaaactctacgcagatgatgttagccttctcgtcgttacgctt
gataccaatcccttcttctggtccacattctccgttccgttctccgattttctctctcag
gtgcttgcgtttttgaactcaatattgcttctcagccaactcaatcaactggttgttatt
gccactggttgcaattcgtgtggctatgtttatgattctgcttccagtaagaaccttgtt
tcccctacggcttcaatgcccgcgctttattccaatttgctgcacaatttggaacagttc
gttgctagggaccagaaattggccaagcctgatcatgatactcgagggattgttccggct
tcactgctatcaggagcattgtccatggccctttgttatatacagagagcttttcgatcc
ggatccatgcatcctcaaccccggattttgtgtttgcaaggatctgctgatggaccggaa
cagtatgtggcaatcatgaatgcaatattttctgcacagcgctctacagttcctatagat
tcttgttatattggttctaacaattctgcgttcctccagcaggcttcatacataactggt
ggcatatattacaagcctccccaattggatgggctttttcaatatctttcaacggtgttt
gcaactgatttgcattctcgtgcttttttacggcttcctaaatctttgggtgtggatttt
cgtgcctcgtgtttttgccataagcaaacaattgacatgggctatgtatgttctgtatgc
ttatccatattctgtgagcgtcatgataagtgttcaacttgcggatctgtatttggccaa
gctaaacaagatgttacctcagctaataccaagaaaagaaaagcttga

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