KEGG   Lupinus angustifolius (narrow-leaved blue lupine): 109346368
Entry
109346368         CDS       T04664                                 
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like
  KO
K14442  ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
Organism
lang  Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lang00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109346368
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lang03019]
    109346368
Enzymes [BR:lang01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     109346368
Messenger RNA biogenesis [BR:lang03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     109346368
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C DEAD dsrm HA2_N AAA_22 nSTAND3 AAA_19 AAA_11 T2SSE ATPase Dicer_dimer Zeta_toxin AAA_23
Other DBs
NCBI-GeneID: 109346368
NCBI-ProteinID: XP_019441434
Position
LG04:complement(23760855..23774552)
AA seq 1197 aa
MLSTITISYMQQQPLKTLKPSIPPFLAMKDRPPLTSYGNIYVPPHHRLRSIVVAPAKYNS
PAAPKLRENQIPLQNPMTTAPAINALQPQVPSKAKPRYVSAYDDDEVSEEGSEREFEPPS
LSVTSASPNYNTGDWKQKLTMLLNDNSKQELISRDKKDRRDFDQIAVWASRMGLYSHMYT
KVVVFSKVPLPNYRYDLDDRRPQREVRLPITIFKQVDAHFEEYLSQKSRMKEGFSDSSFA
RSSSGSSTGTDEGLFEQYEPLASSKGVTDKILWLRSSQMRDQQQVWQESPEGKRMLEFRS
TLPAYKEKEAILSVISSNQVIIISGQTGCGKTTQIPQFILESEIQSVRGAACNIICTQPR
RISAMSVSERVAFERGEKLGESVGYKVRLEGTKGRDTHLLFCTTGILLRRLLADRNLKGV
THVIVDEIHERGMNEDFLLIVLKDLLPHRPELKLILMSATLDAELFSSYFNRAPIMNIPG
FTYPVKTHFLENILDMTGYRLTPYNQIDDYGQERMWKMNKQTPRKRKSQIASTVEDAIGA
ADFNDYSPQTQESLSCWNPDCIGFSLIEYLLCNICKNEKPGAVLVFMTGWDDISSLKEKL
LTHPVLGDPSRVLLLTCHGSMASSEQRLIFEEPENGVRKIVLATNIAETSITINDVVFVL
DCGKAKETSYDALNNTPCLLPTWISKVSAQQRRGRAGRVQPGECYHLYPSCVYDAFAEYQ
LPEILRTPLQSLCLQIKSLRLGSISEFLARALQSPEILAVQNAIEYLKTIGALDENENLT
ILGRYLTMLPMEPKLGKMLILGSIFNCLDPILTVAAGLSVRDPFLTPLDKKDLAEAAKSQ
FSGAYSDHLALVKAYEGWKYAEIDQGGYEYCWKNFLSAQSMKAIDALRREFLCLLKDSEL
VDNNAASCNTWCHDVNLIRAVICYALYPGICSVVHNEKSFSLKTMEDGQVLLYSNSVNAR
ETTIPYPWLVFNEKIKVNSIFLRDSTAVSDSAMLLFGGSLSKGDADGHLKMLGGYLEFFM
EPAVADMYQSIRREFDGFIQGKLRFPRMDTHLYHELLSAVRLLLSNDKCEGRFVFGRKLL
KKPSKPSMTVASHPALVSRTETGPGGDNSKSQLQTLLTRARYAAPVYKTQQLKNNQFQST
VEFNGMQIMGQPCNNKKSAEKDAAAAALQWLIGGKQTGNEYINHVSMLLKKSKKDHN
NT seq 3594 nt   +upstreamnt  +downstreamnt
atgctctcaactatcaccatctcttatatgcaacagcaaccactcaaaaccctaaaacct
tcaattccaccattcctcgccatgaaggaccgtcctccgctgacatcctacggcaacatc
tacgttccgccgcaccaccgcctccgctccatcgtcgtcgcccccgccaaatacaactct
cccgccgctcctaagctccgtgaaaaccaaattccacttcaaaaccctatgaccaccgct
cctgctattaatgctctgcaacctcaagttccctccaaggcgaagccgcgctatgtttct
gcttatgatgacgacgaagtttctgaggaaggctctgagcgtgaatttgagcctccttca
ctatccgtcactagtgcttcccccaattacaatactggtgactggaagcagaaattaacc
atgctcttaaatgacaatagtaagcaagagttgatctcaagggataaaaaggataggcgt
gattttgaccaaatagcggtttgggcaagcagaatggggttgtatagccatatgtataca
aaagtcgtggtcttcagtaaggtcccacttccaaactatagatatgatttggatgaccgg
cggccacagagggaggtgagattgccaattacaatttttaagcaagttgatgcacatttt
gaggaataccttagccaaaagtccaggatgaaggaaggcttttcagattcatcatttgca
agatcaagcagtggcagtagtactggtacagatgaaggactttttgagcaatatgagccg
ctagcgtccagtaagggtgttacagataaaattctctggctgagaagctcacaaatgcgt
gatcagcaacaagtttggcaggaatctcctgaaggaaaaagaatgctagaatttcgtagc
actctccctgcttataaagagaaagaagctatattgtcagtcatatcaagtaaccaggta
attatcatttcagggcaaacaggttgtggcaagacaacacaaattcctcaatttattctt
gaatctgagatacaatcagttcgtggagctgcttgtaatatcatatgcacacagccaaga
cgcatttcagccatgtctgtttcagagagggttgccttcgaaagaggggagaaattgggt
gaatctgtcggatataaagttcgtctggagggaacgaaaggaagagatactcatcttctc
ttttgcaccacgggaatcttactaagaagattgctagctgatagaaatttaaaaggtgta
actcatgttattgtggatgagattcatgagcgtgggatgaacgaagatttcctgcttatt
gtccttaaagatctccttccccatcgaccagaactgaaattgattttgatgagtgcaacc
ctagatgcagagctcttctcttcttactttaacagggctccaataatgaatattccgggc
ttcacataccctgttaaaactcattttttggagaacattcttgatatgacgggctataga
ttgaccccttataatcaaattgatgattatggtcaagaaaggatgtggaaaatgaacaaa
cagaccccaagaaagaggaaaagccaaattgcttccactgtagaggatgcaattggagct
gcggatttcaatgattacagcccacagacacaggagtctttgtcatgttggaatcccgat
tgtattggttttagtctcattgaatatctcttatgcaatatatgcaaaaatgaaaaaccg
ggtgccgttttggtttttatgaccggatgggatgatataagctctctgaaagagaagctc
ctcacacatcctgtcttgggagatccaagccgagttctgttgcttacttgccatggctca
atggctagttcagagcagagattaatatttgaagagcctgaaaatggagtgaggaaaata
gtcctagcaacaaatattgctgaaacaagtatcacgataaatgatgttgtttttgttctt
gactgcggaaaggcaaaagaaacgtcatatgatgctctgaacaacacgccttgtttgctt
ccaacatggatctctaaggtttctgctcaacaaagaagaggaagagctggtcgtgttcaa
ccaggagagtgttaccatctctatcctagttgtgtatatgatgcttttgcagagtatcaa
ttgccagaaattttaaggacacctttgcaatctctctgtctgcaaatcaaaagtctaaga
cttggaagtatatcggagttcttggctagggctttgcagtctcctgagatacttgcggtg
caaaatgcaattgaatatttaaaaacaattggggctttggatgagaatgagaatctgact
attctgggacgttacctgacaatgcttcccatggaacccaagcttggcaagatgcttata
ttaggttctatcttcaattgcctggatcccatactaactgttgctgctggccttagtgtg
agagatccttttctaacaccattggataaaaaagatcttgcagaggcagcaaaatctcaa
ttctctggtgcttacagtgatcaccttgcacttgtaaaggcttatgagggttggaagtat
gctgaaatagaccagggtggatatgaatactgctggaaaaattttctatcagcgcaatca
atgaaagctattgatgctcttaggagggagttcttatgcttgcttaaggatagtgaatta
gttgataacaatgcggccagctgcaacacatggtgccatgatgtgaatcttatccgggca
gttatttgctatgctctatatcctggaatttgctctgttgtgcataatgagaaatcattc
tctctgaagacaatggaggatggtcaagtgctgctatattcgaactcggtgaatgctcgg
gaaactacaattccatatccatggctagtttttaatgagaagataaaagtgaactcaatt
tttctccgcgactcaacagctgtgtctgattcggcaatgcttctgtttggtggaagctta
tctaaaggagatgctgatggtcacctgaaaatgttaggaggatatctggagtttttcatg
gagcctgctgttgctgacatgtaccaaagtataaggagagaattcgatggcttcattcag
ggaaaactacgtttcccgaggatggacactcatctgtatcatgagctcctatccgcagtg
cggttgctgctttccaatgacaaatgtgaaggcagatttgtatttggtcgcaagcttctt
aaaaaaccatcaaagccatctatgacggtggcgtcacatccagcattggtttcaaggact
gagacaggacctgggggtgataattctaaaagtcagctccaaaccttgcttacaagagca
agatatgctgcacctgtctacaagactcaacaattgaagaacaatcaatttcagtccaca
gttgagttcaacggaatgcagataatgggtcaaccttgtaacaataagaagagtgcagaa
aaagatgctgctgctgcagcactgcaatggcttattggtggaaaacagacaggcaatgag
tatatcaatcacgtgtccatgctgctaaagaaaagtaagaaggatcacaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (15)   
   Pfam (15)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system