KEGG   Lupinus angustifolius (narrow-leaved blue lupine): 109357654
Entry
109357654         CDS       T04664                                 
Name
(RefSeq) histone deacetylase 6-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
lang  Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03082  ATP-dependent chromatin remodeling
lang03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:lang00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    109357654
   03083 Polycomb repressive complex
    109357654
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lang03036]
    109357654
Enzymes [BR:lang01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     109357654
Chromosome and associated proteins [BR:lang03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     109357654
   HDAC complexes
    Sin3A-HDAC complex
     109357654
    BRAF-HDAC complex
     109357654
    REST complex
     109357654
    SHIP complex
     109357654
    MiDAC complex
     109357654
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     109357654
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    109357654
  Chromatin remodeling factors
   NuRD complex
    109357654
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 109357654
NCBI-ProteinID: XP_019457189
Position
LG01:complement(24142022..24148246)
AA seq 463 aa
MGMGDESGIALPSPGEDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLH
RHMEINRPFLAGPDDIRHFHSPDYVDFLASVSPETLSEAAFSRQLKRFNVGEDCPVFDGL
FNFCQASSGGSIGAAVKLNRGDADIAINWAGGLHHAKKAEASGFCYVNDIVLGILELLKA
HRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDIGVGPGKNYAVNV
PLNDGLDDDSFQGLFRTIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLTVKGHADCLR
FLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVD
PSKMDNLNTPKDMEKIRDMLLEQISRLPHAPSVSFSTTPSGIPVPEEVEENMDRRTKPRI
WSGDDCDSDREDEKAESKCSNINTNMRDSADDMEEDKPDGHCC
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgggtatgggtgacgagagtggtattgcactaccatctcctggtgaagacgctaagaaa
cgaagggtgacttacttctacgaacccaccatcggcgattattactacggccaaggccac
cctatgaagcctcaccgtatccgcatggcccacaacctcattgtacactattccctccac
cgccacatggaaatcaaccgccccttcctcgccggacctgacgacatccgccacttccat
tcccccgattacgtcgatttcctcgcttccgtctcgcctgagactctctctgaggctgcg
ttctctcgacagctcaaacgtttcaacgtcggcgaggattgtccggtgtttgacggcctt
tttaacttctgtcaggcctcttctggaggatcgattggcgccgccgttaaacttaatcgt
ggagacgctgatatcgctattaattgggctggtggcttgcaccatgccaagaaggctgaa
gcttctggattttgttatgttaatgacattgttctcggtattctcgagcttctcaaggct
catcggcgcgtgctgtatgttgatattgatgttcaccatggtgatggtgttgaggaggcc
ttttacactactgatagagtgatgactgtgtcttttcataagtttggggactttttccct
ggcactggacacatcagagacattggagtgggtcccggaaagaattatgctgtcaatgtt
ccattaaatgatggactggatgatgacagtttccagggtttgtttcgaaccatcattcaa
aaagtcatggaggtttatcagcctgatgcagttgttcttcaatgtggagctgattcattg
tccggtgacagattaggttgcttcaacttaactgtcaaaggtcatgcagattgccttcgt
ttccttagatctttcaatgttcctctgatggttttgggtggaggaggatatacgattcgg
aatgttgctcgttgttggtgttatgagacggcagtggcagtaggagtggagcctgataat
aagttgccttataatgaatattatgagtattttggcccagattatactcttcatgtcgat
ccaagcaagatggacaacctaaacacacccaaggatatggaaaaaataagggacatgctg
ctagaacagatttccagacttccccatgctcccagtgtgtcgtttagcacaacaccatca
ggcatcccagttccagaagaggtggaagagaacatggataggagaacaaaacctcgcata
tggagcggtgacgattgtgattctgatcgcgaagatgaaaaggctgagtcaaagtgttca
aacataaataccaatatgcgggactctgcagatgacatggaagaagataagccagatggg
cattgctgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system