KEGG   Lupinus angustifolius (narrow-leaved blue lupine): 109359933
Entry
109359933         CDS       T04664                                 
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like
  KO
K12813  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:3.6.4.13]
Organism
lang  Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lang00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109359933
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lang03041]
    109359933
Spliceosome [BR:lang03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    109359933
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    109359933
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C HA2_N DEAD AAA_22 PWI AAA_19 nSTAND3 T2SSE AAA_30 SRP54 Flavi_DEAD AAA_16 AAA_7 ABC_tran
Other DBs
NCBI-GeneID: 109359933
NCBI-ProteinID: XP_019460172
UniProt: A0A1J7HYM9
Position
LG01:30613986..30617686
AA seq 1047 aa
MDENMKTWVSDKLMSILGYSQPTVVQYMIGLSKQATSPSDLVSKLQEFGFSSSSETNAFA
SEIFSKVSRKSSGLSQYQKQEREAALLAKKQKTYKLLDDDDDDDDVRGVEEGKVSETKSA
SRKGDSNKRQFRKKIEVDDVVDVEEEGILTRERVVRRRTSRDDDDDSESEEERLKDQREK
EELEKHLRERDEAGTRKLTEHKLTQKEKEEAIRRSNALEKDDSLAFRKVSRQEYLKKREE
KKLDELRGDIEDEQYLFEGVKLTEAEKRDLQYKKEIYELVKKRTEDADNANEYRMPDAYD
QDGGVNQEKRFSVAMQRYRDTTAEEKMNPFAEQEAWEEHQIGKARLKYGSKNKKQTSDDY
QFVFEDQIDFIKASVMDGDNVDYEEMEDSLEKSKAKSALEALLEERKKLPIYPYRDELLK
AVDEHQVLVIVGETGSGKTTQIPQYLHEAGYTKRGMIACTQPRRVAAMSVAARVSQEMGV
KLGHEVGYSIRFEDCTSEKTIVKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDI
LFGLVKDISRFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADY
LDAAIVTSLQIHVTQPPGDILVFLTGQEEIETAEEILKHRTRGLGTKIAELMICPIYANL
PTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKSYNPRTGMESLLI
TPISKASAMQRAGRSGRTGPGKCFRLYTAYNFHNDLDDNTVPEIQRTNLANVVLMLKSLG
IHDLLHFDFMDPPPAEALLKALELLFALSALNKLGELTKVGRRMAEFPLDPMLSKMIVAS
EKYTCSEDIISIAAMLSVGNSIFYRPKDKQVHADNARLNFHTGNVGDHIALLKVYNSWKE
TNYSTQWCYENYIQVRSMKRARDIRDQLAGLLERVEIELTSNSSDVDGIKKSITSGFFPH
SARLQKNGSYRTVKHPQTVHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQITELKPDWLV
EIAPHYYQLKDVEDSVSKKMPRGEGRA
NT seq 3144 nt   +upstreamnt  +downstreamnt
atggacgagaacatgaaaacatgggtttccgacaaactcatgtctatactcggttattct
caacccacagttgttcaatacatgattggactctccaaacaagccacgtcaccttccgat
ttggtttcaaaattacaagagtttggattttcatcttcctctgaaactaacgctttcgct
tcagaaattttctccaaggtttctcgtaaatcctctggtttgagtcagtatcagaaacaa
gagagagaagctgcattgttagcgaagaaacagaagacttataaattattagatgatgat
gatgacgacgatgatgttcgcggtgttgaagaaggtaaagtttcggaaacaaaatctgca
tctaggaagggagatagtaataagagacagtttaggaagaaaattgaagttgatgatgtt
gttgatgttgaggaggaggggattttgacacgggagagggtagttaggagacgaacttcg
cgcgatgatgatgatgattcggagtcagaggaagaaaggttgaaagatcagagagagaag
gaggagttagagaaacatcttagagaaagagatgaggctgggacacggaagttgactgag
cataaattaactcagaaggagaaagaagaggcgattcggagatctaatgctttggagaag
gatgattcactagcttttaggaaggtttcgaggcaggagtatttgaagaagagggaagag
aagaaattggatgagttgagaggtgatatagaggatgagcagtatttgtttgagggggtg
aagcttacggaagcagaaaaacgtgatcttcagtataagaaagagatttatgaacttgtg
aagaagcggacggaggatgctgacaatgcgaatgagtataggatgcctgatgcttatgat
caggatggcggtgttaatcaggagaagaggttttctgtggctatgcagcgttacagagat
acaactgccgaggaaaagatgaatccatttgctgaacaggaggcatgggaggagcatcaa
atcgggaaggcaaggctgaagtatggttccaaaaataaaaaacaaacatctgatgattat
cagtttgtttttgaggaccagattgattttatcaaggcatcggttatggatggagataat
gttgactatgaagaaatggaagattcacttgaaaagtcgaaagcaaagtcagctttagag
gcacttctggaggagaggaaaaagttgccaatttacccttatcgcgatgaattgctcaaa
gcagttgatgagcatcaggtgcttgtgattgttggtgaaactggttcgggaaagactaca
cagattccccagtatctgcatgaagctggctacacaaagcgtggaatgattgcatgtact
cagccgcggcgtgttgctgctatgagtgttgctgctcgagtttctcaagaaatgggtgtt
aaactaggacatgaggttggttactccatccgttttgaggattgcacatcagagaagact
attgtgaaatatatgacagatggaatgttattaagggaattccttggcgagccagatctt
gcaagttacagtgttgtaatggtggatgaggctcatgaaagaacactctcaactgatatt
ttgtttggtttagtgaaggatatttctcgtttccggcctgatcttaagttgctgatatct
agtgctacacttgatgcagagaagttcagtgattattttgattctgctccaatattcaaa
attccggggaggcggtatcctgttgaaataaactttacgaaagcaccagaagcagactac
ttagatgcagccattgtcacatcactccaaatccatgtcactcaacctcctggagatata
ttggtcttccttactggtcaagaagaaattgaaacagccgaagaaatattgaagcatcgg
actagaggcttggggactaaaattgctgagttaatgatatgtcctatatatgctaacttg
ccaactgaactccaagctaaaatatttgaacccactcctgaaggggcaagaaaggttgtc
cttgccactaatattgcagaaacgtcattgactattgatgggattaagtatgtcattgat
ccaggattctgtaagatgaaaagttataatccaagaacaggaatggagtcgttgttaata
actcccatctcaaaagcttcagcaatgcaaagagctggtcgttccggaaggacaggtcca
ggtaaatgcttcagattgtatactgcatacaattttcacaatgatttagatgataacact
gttccagaaatacagcggaccaaccttgctaatgtagttttgatgttaaaaagtctcggt
attcatgacttgctgcattttgattttatggatcctccacctgctgaagctttattgaaa
gcattagagcttctatttgcattaagtgcgttaaacaagcttggtgagttaactaaggtt
ggtcgacggatggcagagttcccattggatcccatgttgtcaaaaatgatagtggcttct
gagaagtacacgtgttcagaagacatcatttccattgctgctatgctttctgttggcaac
tcaattttttaccgcccaaaggataaacaagtacatgctgacaatgcaaggttgaatttt
cacactggaaatgttggagatcatattgcattgctgaaggtctacaattcatggaaggag
accaactattcaacacaatggtgctatgaaaattatatacaggtaaggagtatgaaacgg
gctagggatatccgtgatcaacttgcaggtcttttagaaagggttgaaatcgagcttact
tcaaattccagcgatgtagatggcattaagaagtccataacatctggattttttccacac
tctgcacgattgcagaaaaatggatcttatcggactgttaaacatccacaaacagttcac
atacaccctagttcaggattggcacaggttcttccaagatgggttgtataccatgaacta
gtgcttaccaccaaggaatatatgaggcaaatcacagagttgaagcctgattggttggtg
gagatagctccccactattatcagcttaaggatgttgaagattcggtttcaaagaagatg
cctcgtggagaaggacgagcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (28)   

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