KEGG   Labrenzia sp. CP4: ACP90_18090
Entry
ACP90_18090       CDS       T04295                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
lap  Labrenzia sp. CP4
Pathway
lap03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    ACP90_18090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lap03400]
    ACP90_18090
Enzymes [BR:lap01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     ACP90_18090
DNA repair and recombination proteins [BR:lap03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     ACP90_18090
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AMN54016
Position
complement(3929218..3929877)
AA seq 219 aa
MSDYIADHGPVDPPSDCPACPRLVALREELKVAYPDWHNAPVPSFGADAPRLLIIGLAPG
MKGANCTGRPFTGDYAGDLLYQTMIEFGFAEGTYKARPDDGLQLKDAMITNAVRCLPPQN
KPTGAEIKTCRPYLLSTLDANPSIKAVLALGRIAHETFLSALDQRRASFAFAHGARHELP
GTGLTLFDSYHCSRYNTNTGRLTEEMFHSVFRQIRSFIP
NT seq 660 nt   +upstreamnt  +downstreamnt
atgtccgactatatcgcagaccatgggccagtcgatcccccatcagattgtccggcctgt
ccccgccttgttgccctgcgtgaagagctgaaagttgcctatcccgactggcacaacgcg
ccggttccgtcattcggagccgacgcgccgcgtcttctgatcatcggcctggccccgggc
atgaaaggggccaactgcacgggccgcccctttacaggggactatgcgggagatctcctc
taccagaccatgatcgaattcggttttgccgaagggacctataaggcccggccggacgac
ggtctgcagttgaaggatgcgatgatcaccaacgcggtgcgctgcctgccgccgcagaac
aagccaaccggcgcggaaatcaagacctgccgcccgtatcttttgtcgacgctggacgcc
aatccgtcgatcaaggctgtgcttgctctcggccggatcgcgcatgaaacttttctgtcg
gccctggatcagcgtcgggcatctttcgcctttgcccacggcgcacggcatgagcttccc
ggaacgggactgacgcttttcgacagttatcactgctctcgctacaacaccaacacaggc
cgcctcactgaggaaatgttccactcggtcttcaggcagatccggtcgtttattccttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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