KEGG   Labrenzia sp. CP4: ACP90_20995
Entry
ACP90_20995       CDS       T04295                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
lap  Labrenzia sp. CP4
Brite
KEGG Orthology (KO) [BR:lap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lap03016]
    ACP90_20995
Enzymes [BR:lap01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     ACP90_20995
Transfer RNA biogenesis [BR:lap03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    ACP90_20995
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: AMN56127
Position
complement(4575405..4576025)
AA seq 206 aa
MTIRYHKGDLPDLKAYETASAVAVDSETLGLNPHRDRLCVVQLSPGDGSADVVQIARGQS
EAPNLAALMTDTAKPKIFHFARFDVAVLQHYLNIQVSPIWCTKIASKLVRTYTDRHGLKD
ITRELLGVELSKQQQSSDWAAETLSDAQLAYAASDVLHLHALKERLEMMLEREERSHIAR
ACFDFLPTRAELDLKGWEENDIFAHS
NT seq 621 nt   +upstreamnt  +downstreamnt
atgaccatccgctatcacaagggcgatttgcccgatctgaaagcctatgaaacggcaagt
gcggtggcggtcgattccgagaccctgggcctcaacccgcatcgtgaccggctctgtgtt
gtgcagctttcaccgggcgatggcagcgccgatgtggtccagatcgcacgcggccagagc
gaggcgccgaacctcgctgcgctgatgaccgatacggccaaaccgaaaatattccacttc
gcccggtttgatgttgcggtgcttcagcactatctgaacatccaggtctcgccgatctgg
tgtacgaaaatcgcctccaaactggttcggacctatacggatcgccacggactgaaggat
atcacgcgcgaacttctcggggttgaattgtccaagcagcagcagagctcggattgggct
gcagaaacattgagcgacgcccaactggcctacgcggcttcggacgtgcttcatctgcac
gccttgaaggaacggctggaaatgatgctggagcgtgaagaacgtagtcatattgcccgg
gcctgtttcgatttcctgccgacgcgggcagaactcgatctgaagggctgggaagaaaac
gatattttcgcccactcgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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