KEGG   Lysobacter antibioticus ATCC 29479: GLA29479_1490
Entry
GLA29479_1490     CDS       T04526                                 
Symbol
ffh
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
laq  Lysobacter antibioticus ATCC 29479
Pathway
laq02024  Quorum sensing
laq03060  Protein export
laq03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:laq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    GLA29479_1490 (ffh)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    GLA29479_1490 (ffh)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GLA29479_1490 (ffh)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:laq02044]
    GLA29479_1490 (ffh)
Enzymes [BR:laq01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     GLA29479_1490 (ffh)
Secretion system [BR:laq02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   GLA29479_1490 (ffh)
  Eukaryotic Sec-SRP protein
   GLA29479_1490 (ffh)
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_22 CbiA Helicase_RecD cobW AAA_33 AAA_16 DO-GTPase1 APS_kinase ABC_tran AAA_31 YqeC ATP_bind_1 KTI12 AAA_14 AAA NACHT AAA_19 Thymidylate_kin SR_plectin_7 TsaE nSTAND3 AAA_30 AAA_28 AAA_17 ResIII AAA_5 AAA_18 GTP_EFTU ArsA_ATPase
Other DBs
NCBI-ProteinID: ALN62369
UniProt: A0A0S2F9G9
Position
complement(1583975..1585342)
AA seq 455 aa
MFESLTQRLSGTIERLRGRGRLTEENIRESLREVRIALLEADVALPVVQALIERIKIRAV
GQEVLKSLTPGQALIKVVRDELTTVMGSQAADLNLNVPAPAVILMAGLQGAGKTTTVGKL
AKHLRERRKKKVMVVSADVYRPAAIEQLKQLAEQVEVLFFPSDASQKPEDIVRAAIADAR
KSYVDVLLVDTAGRLAIDEAMMSEIKALHAAAAPVETLFVVDSMTGQDAAITAKAFSEAL
PLTGVVLTKTDGDARGGAALSVRYVTGRPIKFIGVGEKPDGLDVFHPDRVASRILDMGDV
LSLVEQVEQQVDKDKAQKLAEKVAKGKKFDLNDMKDQLEQMQNMGGLHGLMDKLPGMGQI
PESVKNQVTGKEVPRMVAIINSMTKKERRNPGLLNGSRRARIAKGAGLTPADVNKLMKQY
QQMEKMMSKLSGGGMKGLMRGMKGMMGGRGGMPFR
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgttcgaatccctgacccaacgtctctccggcaccatcgagcgcctgcgtggccgcggc
cgtctgaccgaggaaaacatccgcgaatcgctgcgtgaggtccgcatcgccctgctcgag
gccgacgtcgccctgccggtcgtgcaggccctgatcgagcgcatcaagatccgcgcggtc
ggccaggaagtgctcaagagcctgaccccgggccaggccctgatcaaggtggtgcgcgac
gagctgaccacggtcatgggctcgcaggccgccgacctgaacctcaacgtgccggcgccg
gcggtgatcctgatggccggcctgcaaggcgccggcaagaccaccaccgtcggcaagctc
gccaagcatctgcgcgagcgccgcaagaagaaggtcatggtggtctcggccgacgtctac
cgtccggccgcgatcgagcagctcaagcagctcgccgaacaggtcgaggtgttgttcttc
ccctcggacgcgtcgcagaagcccgaggacatcgtccgcgcggcgatcgccgacgcgcgc
aagtcctacgtcgacgtgctgctggtcgacaccgccggccgcctcgccatcgacgaggcg
atgatgagcgagatcaaggcgctgcacgccgctgccgcgccggtcgagaccctgttcgtg
gtcgactcgatgaccggccaggacgccgcgatcaccgccaaggctttcagcgaagccctg
ccgctgaccggtgtggtgctgaccaagaccgacggcgacgcccgcggcggcgcggccctg
tcggtgcgttacgtgaccggccgcccgatcaagtttatcggcgtcggcgagaagcccgac
ggcctcgacgtgttccaccccgaccgcgtcgccagccgcatcctcgacatgggcgacgtg
ctgtcgctggtcgagcaagtcgagcagcaggtcgacaaggacaaggcgcagaagctcgcc
gagaaggtcgccaagggcaagaagttcgacctcaacgacatgaaggaccagctcgagcag
atgcagaacatgggcggcctgcacggcctcatggacaagctgccgggcatgggccagatc
ccggaatcggtcaagaaccaggtcaccggcaaggaagtgccgcgcatggtcgcgatcatc
aattcgatgaccaagaaagagcgccgcaacccgggcctgctcaacggctcgcgccgcgcc
cgcatcgccaagggcgccggcctgaccccggccgacgtcaacaagctgatgaagcagtat
cagcagatggaaaagatgatgagcaagctgtccggcggcggcatgaagggcttgatgcgc
ggcatgaagggcatgatgggcggccgcggcggcatgccgttccgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (33)   
   Pfam (33)   
All databases (45)   

Download RDF
DBGET integrated database retrieval system