KEGG   Candidatus Liberibacter americanus: lam_009
Entry
lam_009           CDS       T02902                                 
Symbol
rnd
Name
(GenBank) Ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
lar  Candidatus Liberibacter americanus
Brite
KEGG Orthology (KO) [BR:lar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lar03016]
    lam_009 (rnd)
Enzymes [BR:lar01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     lam_009 (rnd)
Transfer RNA biogenesis [BR:lar03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    lam_009 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: AHA27397
UniProt: U6B6M8
Position
complement(9353..9976)
AA seq 207 aa
MSNIRVHNGDIPVECIDMYTDAIAVDTETLGLVPRRDRLCVVQLSPGDGTADIIQISKDQ
KNAPNLEIMLSDRKREKIFHYGRFDIAVLLNKFGFVVAPVFCTKIASRLVRTYTNYHGLK
DNLKEMLGVEISKSKQSSEWDADVLSYEQLEYAASDVIYLHALRKKLIEKLEKLDRMHLA
NSCFDFIASRAELDLLGWDNIDIFAHS
NT seq 624 nt   +upstreamnt  +downstreamnt
atgtctaatatacgtgttcataatggtgatatcccagtcgaatgtattgatatgtatact
gatgctattgctgtcgatacggaaacacttggcttggttccacgccgagataggctttgt
gttgttcagctatctccaggagatgggactgcagatattatacagatttctaaggatcaa
aaaaatgcccctaatcttgagattatgctctcagatcgaaagcgagaaaaaatttttcat
tatggtcgttttgatatagcagtattattgaataaatttggttttgtagttgctccagtt
ttttgcacaaaaattgcttctcgtttagtgagaacttacactaattatcatggacttaag
gataatttaaaagaaatgttaggggttgagatatcaaagtcaaaacaatcatcagaatgg
gatgctgatgttctatcttatgaacaactagaatatgctgcttcagatgttatttatctt
catgcgttgcgcaaaaaattaattgaaaagcttgagaaattggatagaatgcatttggct
aattcttgttttgactttatagcaagtagggctgaattggatttgcttggctgggataat
attgatatttttgcccatagttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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