KEGG   Candidatus Liberibacter asiaticus psy62: CLIBASIA_00610
Entry
CLIBASIA_00610    CDS       T00948                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
las  Candidatus Liberibacter asiaticus psy62
Pathway
las03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:las00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CLIBASIA_00610 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:las03021]
    CLIBASIA_00610 (rpoA)
   03400 DNA repair and recombination proteins [BR:las03400]
    CLIBASIA_00610 (rpoA)
Enzymes [BR:las01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CLIBASIA_00610 (rpoA)
Transcription machinery [BR:las03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CLIBASIA_00610 (rpoA)
DNA repair and recombination proteins [BR:las03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CLIBASIA_00610 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L DUF211
Other DBs
NCBI-ProteinID: ACT56710
UniProt: C6XHG7
Position
complement(129714..130736)
AA seq 340 aa
MIQKNWQELIKPNNIEYIVLGQEEENRTLMIAEPLPRGFAHTLGNALRRVLMSSLRGAAI
TAVQIDGVLHEISSIKGVHEDLTDIILNIKGINLKMSGDSHKRVTIFKRGPGVVTAGDIQ
TVNDIEVLNPDHVICNLDVDAVVRMELTVSKGHGYVPAKHHRTENDPIGLITIDALYSPI
KKVSYTVESAREGQVLDYDKLSMTIDTDGSITGEDSVALASRILQDQLGMFINFEEPKKE
VKEDINVKSLPFNPALLKKVEELELSVRSTNCLRGENIVYMGDLIQRTEADMLRMANFGR
KSLVEIKGVLGTMGLFLGMNLPDWPPESIEELAKKYEDKC
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgatccaaaaaaattggcaagagttgattaagccgaataatattgaatatatagtcctt
ggacaagaagaagaaaataggactttgatgatagcagaacctcttccccgtggtttcgct
catactcttgggaatgcacttcgtcgtgtgttaatgtcttcgttgcgtggtgctgcaata
actgctgttcaaattgatggtgtattgcatgagatttcttctatcaaaggagtgcacgaa
gatctgacggatattattctgaatatcaagggtattaacctgaaaatgtctggtgattcg
cataagcgggtaactatcttcaagcgtgggcctggagttgttactgcaggtgatatacag
actgttaatgatattgaggtgcttaatccagatcatgttatttgtaatcttgatgtagat
gcggtggttcgtatggaactcacggtttctaagggacatggttatgtccccgctaaacat
cataggacggaaaatgatccaattggtttgattacgattgatgctttatattctcctatc
aaaaaggtttcttatacggtggaaagtgcgcgtgaagggcaggttcttgattatgataaa
ttgagtatgacgattgatactgatggttctattactggagaagattcggttgctttggca
tcacgtattttacaagatcaattggggatgtttattaattttgaagaacccaaaaaggaa
gtaaaagaagacataaatgttaagtctcttccttttaatcctgctcttttgaaaaaagtt
gaagaattagaactttctgttaggtctactaactgtttaagaggtgagaatattgtttat
atgggagatttgattcaaagaaccgaagccgacatgttgcgtatggccaattttggacgt
aaatctcttgtcgaaattaaaggagtgttaggaactatgggattatttctcggcatgaat
ttgccggactggcctcctgaaagtatagaagagttagcgaaaaaatatgaagataagtgc
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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