KEGG   Loxodonta africana (African savanna elephant): 100657549
Entry
100657549         CDS       T04351                                 
Name
(RefSeq) histone deacetylase 5 isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav04371  Apelin signaling pathway
lav04613  Neutrophil extracellular trap formation
lav05034  Alcoholism
lav05203  Viral carcinogenesis
lav05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:lav00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    100657549
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    100657549
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    100657549
   05203 Viral carcinogenesis
    100657549
  09165 Substance dependence
   05034 Alcoholism
    100657549
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lav03036]
    100657549
Enzymes [BR:lav01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     100657549
Chromosome and associated proteins [BR:lav03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     100657549
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln TFIIA
Other DBs
NCBI-GeneID: 100657549
NCBI-ProteinID: XP_023409502
Position
Unknown
AA seq 1008 aa
MRHLPQHGSHSSGLREPLSSEGPARPPFRWLAPASGGPFSGMLLVPKAQGLVEMLQTIYE
TESCFSADGMSGREPSLEILPRTPLHSIPVAVEVKPVLPGAMPSSMGGGSGGSASPVELR
GALAGPVDPALREQQLQQELLALKQQQQLQKQLLFAEFQKQHDHLTRQHEVQLQKHLKVT
EGGAGGRPDARPLSGPNSPPSTPVPLQQQQEMLAAQRQQELEQQRQREQQRQEELEKQRL
EQQLLILRNKEKSKESAIASTEVKLRLQEFLLSKSKEPTPGGLNHSLPQHPKCWGAHHAS
LDQSSPPQSGPPGTPPSYKLPLLGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSP
LLRRKDGTVISTFKKRAVEITGAGPGVSSVCNSAPGSGPSSPNSSHSTIAENGFTGSVPN
IPTEMLPQHRALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAE
RQALQSLRQGGALTGKFMSTSSIPGCLLGVALEGDTSPHGHASLLQHVLLLEQARQQSTL
IAVPLHGQSPLVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQF
LEKQKQQQLQLGKMLTKTGELPRQPTTHPEETEEELTEQQEVLLGEGALTMPREGSTESE
STQEDLEEEEEEEEEEEEEEEEDCIQVKDEEGESGAEEGPDLEESSAGYKKVFSEAQPLQ
PLQVYQAPLSLATVPHQALGRTQSSPAAPGGMKSPPDQPTKHLFTTGVVYDTFMLKHQCT
CGNTHVHPEHAGRIQSIWSRLQETGLLSKCERVRGRKATLDEIQTVHSEYHTLLYGTSPL
NRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAA
GELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGT
QQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVQLLGPKVGPLGEAAE
NT seq 3027 nt   +upstreamnt  +downstreamnt
atgaggcacctcccacagcacggttcccacagcagtggcctgagggagcccctgagcagt
gagggccccgcccgaccacctttccgctggctggctcccgcctcgggcggccccttctct
ggcatgctgctggtgcccaaggcccaggggctcgtggagatgctgcagaccatctatgag
acggaatcgtgtttctcagcagatggaatgtcaggccgggagccatccttggaaatcctg
ccgcgtactcctctacacagcatccctgtggcagtggaggtgaagccagtgctgccggga
gccatgcccagctccatggggggtggcagtggaggcagtgctagccccgtggagcttcgg
ggagctctggcaggccctgtggaccctgcgctacgtgagcagcaactccagcaggagctg
ctggcgctcaagcagcagcagcagctgcagaaacagctcctgtttgccgagttccagaag
cagcacgaccacctgacacggcagcacgaagtccagctgcagaagcacctcaaggtgacc
gagggaggtgcagggggccgcccagacgcccgacccctgtctgggcccaactcaccacct
tctacccctgtgcccctgcagcagcagcaggagatgctggcagcccagaggcagcaggag
ttggagcagcagcggcagcgggagcagcagcggcaggaggagctggagaagcagcgcctg
gagcagcagctgctcatccttcggaacaaggagaagagcaaagagagtgccatcgccagc
accgaggtgaagctgaggctccaggaattcctgttgtcgaaatcaaaggagcccactccg
ggcggcctcaaccattccctcccgcagcaccccaaatgctggggagcccaccatgcttct
ttggaccagagttcccctccccagagcggccctcctgggacgcctccttcctacaaactg
cctttgcttgggccctatgacagccgcgatgacttccccctccgcaaaacagcctctgaa
cccaacttgaaagtgcgttcaaggctaaagcagaaggtggccgagcggagaagcagtccc
ctcctgcgccgcaaggatgggactgttattagcacctttaagaagagagctgttgagatc
acaggtgctgggcctggggtgtcgtctgtgtgtaacagcgcgccaggctctggtcctagt
tctcccaacagctcccacagcaccatcgctgagaacggctttactggctccgtccccaac
atccccaccgagatgctcccccagcaccgggccctccctctggacagctcccccaaccag
ttcagcctctacacgtccccctctctgcccaacatctccctagggctgcaggccaccgtc
accgtcaccaactcgcacctcaccgcctccccaaagctgtcaacgcagcaagaggccgag
aggcaggccctccagtccctgcggcagggtggtgcgctgacgggcaagttcatgagcaca
tcctccatcccgggctgcctgctgggtgtggcgctggagggcgacacgagtccccacggg
cacgcctccctgttgcagcatgtgctgctgctggagcaggcccggcaacagagcaccctc
attgccgtgccactccacgggcagtccccactggtgacaggcgaacgtgtggctaccagc
atgcggacggtaggcaagctcccacgacatcggcccctgagccgcacgcagtcctcgccg
ctgccgcagagcccccaggccctgcagcagctggtcatgcagcagcagcaccagcagttc
ctggagaagcagaagcagcagcagctgcagctgggcaagatgctcaccaagactggggag
ctgcctcggcaacccaccacccaccctgaggagactgaggaggagctgacagagcagcag
gaggtgctgctgggggagggagccctgaccatgccccgggaaggctccaccgagagtgag
agcacccaggaggatctggaggaggaagaggaggaggaggaggaggaggaagaggaggag
gaggaagactgcatccaggtcaaggacgaggagggcgagagtggtgctgaggagggacct
gatctggaggagtccagtgctggttacaaaaaggtgttttcagaggcccagcccctgcag
ccactacaggtgtaccaggcacccctcagcctggccactgtgccccaccaggccttgggc
cgcacccaatcctcacccgctgcccctgggggcatgaagagccccccagaccagcccacc
aagcacctcttcaccacaggtgtggtctatgacacattcatgctgaagcaccagtgcacg
tgcgggaacacacacgtgcaccccgagcacgctggccggatccagagcatctggtctcgg
ctgcaggagacaggcctgctgagcaagtgtgagcgggtccggggccgcaaggccacactg
gatgagatccagacggtgcactccgagtaccacaccctgctctatgggaccagccctctc
aaccggcagaagctggacagcaagaagctgctcggccccatcagccagaagatgtatgcc
atgctgccgtgtgggggcattggggtggacagtgacactgtgtggaacgagatgcactcc
tccagtgccgtgcgcatggcggtgggctgcctggtggagctggccttcaaggtggctgca
ggagagctcaagaatggatttgccatcatacggcccccaggacaccacgctgaggagtcc
acagccatgggattctgcttcttcaattctgtagccatcacagcaaaactcctgcagcag
aagttgaacgttggcaaggtcctcatcgtggactgggacatccaccacggcaacggcacc
cagcaggcgttctacaacgacccctctgtgctctacatttccctccatcgctatgacaac
gggaacttctttccaggcagtggggcgcctgaagaggtacagctcctgggcccaaaggtg
gggcccctcggggaagcagcggagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (3)   
   Pfam (3)   
All databases (47)   

Download RDF
DBGET integrated database retrieval system