KEGG   Loxodonta africana (African savanna elephant): 100662699
Entry
100662699         CDS       T04351                                 
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X2
  KO
K08525  retinoid X receptor beta
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav03320  PPAR signaling pathway
lav04659  Th17 cell differentiation
lav04919  Thyroid hormone signaling pathway
lav04920  Adipocytokine signaling pathway
lav04928  Parathyroid hormone synthesis, secretion and action
lav05200  Pathways in cancer
lav05202  Transcriptional misregulation in cancer
lav05207  Chemical carcinogenesis - receptor activation
lav05216  Thyroid cancer
lav05222  Small cell lung cancer
lav05223  Non-small cell lung cancer
lav05226  Gastric cancer
lav05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:lav00001]
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    100662699 (RXRB)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    100662699 (RXRB)
   03320 PPAR signaling pathway
    100662699 (RXRB)
   04919 Thyroid hormone signaling pathway
    100662699 (RXRB)
   04928 Parathyroid hormone synthesis, secretion and action
    100662699 (RXRB)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100662699 (RXRB)
   05202 Transcriptional misregulation in cancer
    100662699 (RXRB)
   05207 Chemical carcinogenesis - receptor activation
    100662699 (RXRB)
  09162 Cancer: specific types
   05226 Gastric cancer
    100662699 (RXRB)
   05216 Thyroid cancer
    100662699 (RXRB)
   05222 Small cell lung cancer
    100662699 (RXRB)
   05223 Non-small cell lung cancer
    100662699 (RXRB)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    100662699 (RXRB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lav03000]
    100662699 (RXRB)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:lav03310]
    100662699 (RXRB)
Transcription factors [BR:lav03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    100662699 (RXRB)
Nuclear receptors [BR:lav03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   100662699 (RXRB)
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1
Other DBs
NCBI-GeneID: 100662699
NCBI-ProteinID: XP_003421092
Position
Unknown
AA seq 532 aa
MSWTARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAAAGEQQTP
EPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPHGAPPPSPPGPPLPPSAAPSLGGTGAPPQ
PPLPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKP
PVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSC
RDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPV
ERILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFS
SLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVL
TELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPE
QQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgtcttggactgctcgcccgcccttcctcccccagcggcatgccgcagggcagtgtggg
ccggtgggggtgcgaaaagagatgcattgtggggtcgcgtcccggtggcggcggcgacgg
ccctggctggatcccgcagcggcggcggcggcggcggcagcgggagaacaacaaaccccg
gagccggaaccgggggaggctggacgggacgggatgggcgacagcgggcgggactctcga
agcccagacagctcctccccaaatccccttccccacggagcccctcctccttctcctcct
gggccacccctgcccccttcagcagccccatcccttggaggcactggggctccaccccaa
cccccgctgccaccacctccactgggatcccccttcccagtcatcagctcttccatgggg
tctcccggtctgccccctccagctcccccaggattctccgggcctgtgagcagcccccag
attaactcaacagtgtcgctccctgggggtgggtctggcccccctgaagatgtgaagcca
ccagtcttaggggtccggggcctgcactgtccaccccctccaggtggccctggggctggc
aaacgtctgtgtgcaatctgcggggacagaagctcaggcaaacactatggggtgtacagc
tgtgagggttgcaagggcttcttcaagcgcaccatccgtaaggacctgacctactcgtgc
cgggacaacaaggactgcacagtggacaagcgccagcggaaccgctgtcagtactgccgc
tatcagaagtgcctggccacaggcatgaagagggaggcggtacaggaggagcgtcagcgg
gggaaggacaaggatggggacggagagggggctgggggagcccccgaggagatgcctgtg
gagaggatcctggaggcagagcttgctgtggaacagaagagtgaccagggcgttgagggt
cctgggggaactgggggtagtggcagcagtccaaatgaccctgtgacaaacatctgtcag
gcagctgacaaacagctcttcacacttgttgagtgggcgaagaggattccacacttttcc
tccttgcctctggatgaccaggtcattttgctacgggcagggtggaacgagctcctcatt
gcctccttctcccatcgatccattgatgtccgagatggcatcctccttgccacaggtctt
catgtgcaccgcaattcagcccattctgcaggcgtgggagccatctttgatcgggtgctg
acagagctagtgtccaaaatgcgtgacatgaggatggacaagacagagcttggctgcctg
agggcaatcattctcttcaatccagatgccaagggcctctccaaccccagcgaggtggag
gtcctgcgggagaaagtatatgcgtcactggagacctactgcaaacagaagtaccctgag
cagcagggacggtttgccaagctgctgctacgtcttcctgccctccggtccattggcctc
aagtgtctagagcatctgtttttcttcaagctcattggtgacacccccattgataccttc
ctcatggagatgcttgaggctccccaccagctggcctga

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