KEGG   Loxodonta africana (African savanna elephant): 100665303
Entry
100665303         CDS       T04351                                 
Symbol
TNPO1
Name
(RefSeq) transportin-1
  KO
K18752  transportin-1
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:lav00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100665303 (TNPO1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lav03019]
    100665303 (TNPO1)
   03009 Ribosome biogenesis [BR:lav03009]
    100665303 (TNPO1)
Messenger RNA biogenesis [BR:lav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100665303 (TNPO1)
Ribosome biogenesis [BR:lav03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    100665303 (TNPO1)
  Pre-60S particles
    100665303 (TNPO1)
SSDB
Motif
Pfam: HEAT_EZ HEAT HEAT_2 Vac14_Fab1_bd Arm Cnd1 IBN_N PDS5 Adaptin_N CEP104-like_TOG MMS19_C UNC45-central Dopey_N RTP1_C1 DUF3689
Other DBs
NCBI-GeneID: 100665303
NCBI-ProteinID: XP_023401304
Position
Unknown
AA seq 866 aa
LDPEKETNSLIKLEQLNQYPDFNNYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFQNFP
NGVTDFIKSECLNNIGDASPLIRATVGILITTIASKGELQNWPDLLPKLCSLLDSEDYNT
CEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIIS
RTQALMLHIDSFIENLFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQR
TQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGMKYSDIDIILLKGDVEE
DETIPDSEQDIRPRFHRSRTVAQQHDEDGIEEEDDDDDEIDDDDTISDWNLRKCSAAALD
VLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLI
QCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAF
ATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQM
LMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAM
LNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVR
QSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQ
PYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI
RDNEEKDSAFRGICTMISVNPSGVIQDFIFFCDAVASWISPKDDLRDMFCKILHGFKNQV
GDENWRRFSDQFPLPLKERLAAFYGV
NT seq 2601 nt   +upstreamnt  +downstreamnt
ttggatccagaaaaggaaacaaattcactcatcaaactggaacaactcaatcaataccca
gattttaacaactacctgatttttgttcttacaaaattaaaatctgaagatgaacccaca
agatcattgagtggtctcatcttgaagaataacgtgaaagctcattttcagaatttcccg
aatggtgtcacagactttattaaaagtgaatgtctaaataatattggtgatgcttctcct
ctgattagagccaccgtaggtattttgattacaaccatagcctccaagggagaattgcag
aattggcctgacctcttaccaaaactctgcagccttttggattctgaggattacaacacc
tgtgaaggagcgtttggtgctcttcagaagatatgtgaagattctgctgagattttagat
agtgatgttttagatcgtcctctcaacatcatgattcccaaatttttacagttcttcaag
cacagtagtccaaaaataaggtctcatgctgttgcatgtgtcaatcagtttatcatcagt
aggactcaagctctgatgttgcacattgattcttttattgagaatctgtttgcattggct
ggtgacgaagaaccagaggtacgaaaaaacgtatgccgggcgcttgtgatgttgctggaa
gttcgaatggatcgcttgcttcctcacatgcataatatagttgagtacatgctacagaga
acccaagatcaagatgaaaatgttgctttagaagcttgtgagttttggctcactttggca
gaacaaccaatatgcaaagatgtactcgtaaggcatcttcctaagttgattcctgtgtta
gtgaatggcatgaagtactcagacatcgatattatcctattgaagggtgatgttgaagaa
gatgagacgattcctgatagtgagcaggatattaggccacgttttcatcgatcaaggaca
gtggctcagcagcatgatgaagatggaattgaagaggaagatgatgatgatgatgaaatt
gatgatgatgataccatttctgactggaatctaagaaaatgttctgccgcggccctagat
gtacttgcaaatgtgtatcgtgacgaacttttgccacatattttgcctcttttgaaagaa
ttactttttcatcatgagtgggttgttaaagaatcgggcatcttggttttaggagcaatt
gctgaaggttgcatgcagggtatgattccatacctgcctgagctcattcctcaccttatt
cagtgcctctctgataaaaaggctcttgtgcgttccataacgtgctggactcttagccgc
tatgcacactgggtggtcagccagcccccagacacgtacctgaagccattaatgacagaa
ttgctaaagcgtatcctggatagcaacaagagagtacaggaagctgcctgcagtgccttt
gctaccctagaagaggaggcttgtacagaacttgttccttaccttgcttacatacttgat
accctggtcttcgcatttagtaaataccagcataagaacctgctcattctttacgatgcc
ataggaacattagcagattcggtaggacatcatttaaacaaaccagagtatattcagatg
ctaatgcctccactgatccagaaatggaacatgttaaaggacgaagataaagatctcttt
cctttacttgagtgcctatcttcagttgccacagccctgcagtctggcttccttccgtac
tgtgagcctgtgtatcagcgttgtgttaacctagtacagaagactcttgcacaagccatg
ctgaacaatgctcaaccagatcagtatgaggctccagataaagattttatgatagtggct
cttgatttactgagtggcctggctgaaggacttggaggcaacattgaacagctagtagca
cgaagtaacattctaacactaatgtatcagtgcatgcaggataaaatgccagaagttcgg
cagagttcctttgccctcttaggtgacctgacaaaagcttgctttcagcatgttaagcct
tgtatagctgatttcatgccaatattgggaaccaacctaaatccagagttcatttctgtt
tgcaacaatgccacttgggcaattggagaaatctccattcagatgggaatagagatgcag
ccttatatccctatggtgttgcaccagcttgtagaaatcatcaacagacccaacacacca
aagacgttgttagagaacacagcaataacaattggtcgtcttggttacgtttgtcctcaa
gaggtggcccccatgctacagcagtttataagaccctggtgcacctctctgagaaacata
agggacaatgaggaaaaggattcagcattccgtggaatttgtaccatgatcagtgtgaat
cccagtggagtaatccaagattttatatttttttgtgatgctgttgcatcatggattagc
ccaaaagatgatctcagagacatgttctgtaagatccttcatggatttaaaaatcaagtt
ggggatgaaaattggaggcgtttctctgaccagtttcctcttcccttaaaagagcgtctt
gcagctttttatggtgtttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (15)   
   Pfam (15)   
All databases (40)   

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