KEGG   Loxodonta africana (African savanna elephant): 100666529
Entry
100666529         CDS       T04351                                 
Symbol
ABCA1
Name
(RefSeq) ATP-binding cassette sub-family A member 1 isoform X2
  KO
K05641  ATP-binding cassette, subfamily A (ABC1), member 1
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav02010  ABC transporters
lav04148  Efferocytosis
lav04975  Fat digestion and absorption
lav04979  Cholesterol metabolism
lav05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:lav00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    100666529 (ABCA1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    100666529 (ABCA1)
 09150 Organismal Systems
  09154 Digestive system
   04975 Fat digestion and absorption
    100666529 (ABCA1)
   04979 Cholesterol metabolism
    100666529 (ABCA1)
 09160 Human Diseases
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    100666529 (ABCA1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:lav02000]
    100666529 (ABCA1)
Transporters [BR:lav02000]
 ABC transporters, eukaryotic type
  ABCA (ABC1) subfamily
   ABCA1, 2, 3, 4, 7, 12, 13 subgroups
    100666529 (ABCA1)
SSDB
Motif
Pfam: ABC_tran ABC2_membrane_3 AAA_21 DUF4162 AAA_23 Mst1_SARAH
Other DBs
NCBI-GeneID: 100666529
NCBI-ProteinID: XP_003407869
UniProt: G3TFC5
Position
Unknown
AA seq 2261 aa
MAYWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILMSVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDARRLLLYSQKDT
SMKDIHKVLRTLQQFENSSSSLTLQDFLVDNETFSGFLHHNLSLPRPTVDKMMGADVRLH
KVFLHGYQLHLTNLCNGSKLGEVIQLGDQEVSKLCNLPREKLDAAEQVLRSNMDILKPIL
AGLNSTSPFLSKELAEATKTLLDSLGTLAQELFSMRSWSDMRQEVMFLTNVNSSSSATQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEEDAGTFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLVGKILYTPNTTATRQVMAEVNKTFQELAVFHHLEGMWEELS
PKIWTFVESSQEMDLVRTLLDSRGSDHFWEERLDGSGWTPQDVAAFLAKHPEDVQAITGS
VYTWREAFNETNQAIKTISRFMDCVNLNKLEPIATEVQLINKSMELLDERKFWAGIVFTG
INPNSDELPYHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFDDMRYIWGGFTYLQDVV
EQAIIRVLTGTENKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSASLLVVILKLGNLLPYSDPSVVFV
FLSVFAVVTILQCFLISTFFSRANLAAACGGIIYFILYLPYVLCVAWQDYVGFTLKVFAS
LLSPVAFGFGCEYFALFEEQGTGVQWDNLFESPVEGDGFNLTTSVSIMLFDTFLYGVMTW
YIEAVFPGQYGIPKPWYFPCTKSYWFGEESNEKSHPCSSQKGVSEICMEEEPTHLKLGVS
IQNLVKVYRNGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYACLKGLSEKHVKAEMEQMALDVG
LPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLS
SCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVAEARLVEDI
GHELTYVLPYEAAREGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAE
TSDGTLPARRNRRAFGDRQSCLRPFTEDDAVDPTDSDIDPESRETDLLSGVDGKGSYQVK
GWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQ
PWMYNEQYTFVSNDAPEDLATQELLNALTKDPGFGTRCMEGNPIPDMPCLVGEEEWTTAP
VPQTIMDLFQKGNWTMENPSPACQCSNDKIKKMLPVCPPGAGGLPPPQRKQSSADILQNL
TGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSQGLPPSEEVNDAIKQVKK
HLKLTKDSSADQFLSSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANVQK
GENRRKYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLAL
LLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLSNIN
DILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEG
VVFFLITVLIQYRFFIRPRPVNAKLPPLNDEDEDVRRERQRILDGGGQNDILEIKELTKI
YRRKRKPAVDRICIGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSILSN
IHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLLKYGEK
YAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVVLT
SHSMEECEALCTRMAIMVNGKFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEFFG
LAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSRKQLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq 6786 nt   +upstreamnt  +downstreamnt
atggcttactggcctcagttgaggttgctgctgtggaagaacctcactttcagaagaaga
caaacatgtcagctgttgctggaagtggcctggcctctatttatcttcctgatcctgatg
tctgttcggctaagctacccaccctacgaacaacatgaatgccactttccaaacaaagcc
atgccctctgcaggaacacttccgtgggttcaggggattatctgtaatgccaacaatccc
tgtttccgttatccgactcctggtgaggctcctggggttgttggaaactttaacaaatcc
atagtgtctcgcctattctcagatgctcggagactacttttatatagccagaaagacacc
agcatgaaggacatacacaaagttctgagaacattacagcagttcgagaattccagctca
agtttgacgcttcaggacttccttgtggacaatgaaaccttctctggattcctgcatcac
aacctctctctgccaaggccgactgtggacaagatgatgggggctgatgtcagactccac
aaggtatttttgcatgggtaccagttacatttgaccaacctgtgcaatggatcaaaatta
ggagaagtgattcaactaggtgaccaagaagtttccaagctttgcaacctgccaagggag
aaactagatgctgcagagcaagtacttcgttccaacatggacatcctgaagcccatcctg
gcgggcctaaactccacatctccgttcctgagcaaggagctggctgaagccacaaaaacg
ttgctggatagccttgggaccctggcccaagagctgttcagcatgaggagttggagtgac
atgcggcaggaggtgatgtttttgaccaatgtgaacagctccagctccgctacccagata
taccaggcagtgtcccgcattgtctgtggccatcccgagggtgggggcctgaagatcaag
tccctcaactggtatgaggacaacaactacaaagccctctttgggggcaatggcactgag
gaagatgctggcaccttctatgacaattctacaaccccttattgcaatgatttgatgaag
aatttggagtctagtcctctttcccgcattatctggaaagctctcaagcctctgcttgta
ggaaagatcctgtatacacctaacactacggccacgaggcaggttatggctgaggtgaac
aagaccttccaggagctggctgtgttccaccatctggaaggcatgtgggaagaactcagc
cccaagatctggaccttcgtggagagcagccaagaaatggaccttgtccggacattgttg
gacagcagaggcagtgaccacttttgggaagagcggttggatggctcaggctggacaccc
caggacgttgcggcatttctggccaagcacccagaggatgtccaggccattactggctct
gtgtatacctggagagaagctttcaatgagacgaaccaggcaataaagaccatatctcgc
ttcatggactgtgtcaaccttaacaaactggaaccaatagcaacagaagtccagctcatc
aacaagtccatggagcttctggatgagaggaagttctgggctggtattgtgttcactgga
attaatcccaacagtgatgagcttccctatcatgtcaagtacaagattcgaatggacatt
gacaatgtggagaggacaaataaaatcaaggatgggtactgggacccgggtcctcgggct
gacccctttgatgatatgcggtacatctggggtggcttcacctacttgcaggacgtggtg
gagcaggccatcatcagggtgctgacgggcactgagaataaaaccggtgtctacatacag
cagatgccctacccatgttatgttgatgacatcttcctgcgggtgatgagccggtccatg
cccctcttcatgacgctggcctggatatactctgtggctgtgatcatcaagggcattgtg
tacgagaaggaggcgcggctgaaggagaccatgcggatcatgggcctggacaatggcatc
ctctggtttagctggttcatcagcagccttatccctctgcttgtgagcgccagcctactg
gtggtcatcctgaagttaggaaacttgctgccctatagcgaccccagtgtggtgtttgta
ttcctctctgtgtttgccgtggtgaccatcctgcagtgcttcctgataagcacgttcttc
tccagagccaacctggcggcagcctgtgggggcatcatctacttcatcctgtacctgccc
tacgtcctgtgtgtggcatggcaggactacgtgggcttcaccctcaaggtctttgcaagc
ctactgtctcctgtggcttttgggtttggctgtgagtacttcgcccttttcgaggagcag
ggcactggcgtgcagtgggacaacctgttcgagagccctgtggagggagatggcttcaac
ctcactacctcagtctccataatgctgtttgacactttcctctatggggtgatgacgtgg
tacattgaggctgtctttccaggccagtatggaattcccaagccctggtattttccttgt
actaagtcctattggtttggtgaggaaagtaatgagaagagccatccctgttccagccag
aagggagtatcagaaatctgtatggaggaggagcccactcacctgaagctgggtgtgtcc
attcagaacctggtgaaggtttaccgaaatggcatgaaggtggcagttgatggcctggca
ctgaatttttatgaaggccagatcacctccttcctgggccacaatggagcgggaaagacc
accaccatgtccatcctgactgggttgttccctcccacctcgggcaccgcctatatcctg
gggaaagacattcgctcagagatgagcacgatccggcagaacctgggggtctgtccccag
cataatgtgctgtttgacatgctgactgtcgaagagcacatctggttctatgcctgcctg
aaaggcctctctgagaagcacgtgaaagcagagatggagcagatggctctggatgtcggc
ctgcctcccagcaagctaaaaagcaaaacaagtcagctgtcaggtggaatgcagagaaag
ctgtctgtggccttggccttcgtggggggatccaaggttgtcattctggacgagcccaca
gctggtgtggacccttactcccgcagggggatatgggagctgctgctaaagtatcgacaa
ggccgcaccattattctctccacacaccacatggatgaagcagacattctgggggacagg
attgccatcatttcccatgggaagctgtgctgtgtgggctcctctctgttcctgaagaac
caactgggaacaggctactacctcaccctggtcaagaaggatgtggaatcctccctcagt
tcctgcagaaatagcagtagcactgtgtcatacctgaaaaaggaggacagtgtttctcag
agcagttctgatgctggcctgggcagcgaccatgaaagtgacacactgaccatcgatgtc
tctgctatctccaacctcatcaggaagcatgtggctgaggcacggctggtggaagacatt
gggcatgagctgacctacgtgctgccctatgaagctgctagggagggggcctttgtggaa
ctcttccatgagattgatgaccggctctcagatctgggcatctctagttacggcatctca
gagaccaccctggaagaaatattcctcaaagtggctgaagagagcggggttgatgctgag
acctcagatggcaccttgccagcaagacggaacagacgggcctttggggacaggcagagc
tgtcttcgcccattcacagaagatgatgccgtagatcccactgattctgacatagaccca
gagtccagagagacagacctgctcagtggagtggatggcaaaggctcctaccaagtgaag
ggctggaaactcacacagcaacagttcgtggcccttttgtggaagaggctactgattgcc
aggaggagccggaagggattctttgctcagattgtgctacccgctgtgtttgtctgcatc
gccttggtgttcagcttgattgtgccaccctttggcaaataccccagcctggaacttcaa
ccctggatgtacaatgagcaatacacgtttgtcagtaacgatgctcctgaggacttggcc
acccaggaactcttgaatgccctcactaaagaccctggctttggaacccgatgtatggaa
ggaaatcccatcccagatatgccctgcttggtgggggaggaggagtggaccaccgcccca
gttccccagaccatcatggacctcttccaaaaggggaactggacgatggagaacccttca
cctgcctgccagtgtagcaatgacaaaatcaagaagatgctgcccgtgtgtcccccaggg
gcaggggggctgcctcctccacaaagaaaacagagcagtgcggacatccttcagaacctg
acgggaagaaacatttcagattatctggtgaagacatatgtgcagatcatagccaaaagc
ttaaaaaacaagatctgggtgaatgaatttaggtatggtggattttccctgggtgccagt
aattctcaaggacttcctccaagtgaagaagttaatgatgccatcaagcaagtgaagaaa
cacttgaagctgaccaaggacagttctgcagatcaatttcttagcagcttgggaaggttt
atgactggactggacaccaaaaataacgtcaaggtgtggtttaacaacaaaggctggcat
gccatcagctctttcctgaatgtcatcaacaatgccattctccgggccaacgtgcagaag
ggagagaaccggagaaaatatgggattactgctttcaatcaccccctgaatctcaccaag
cagcagctctcagaagtggctctaatgaccacgtcagtggatgtccttgtttccatctgt
gtcatcttcgcgatgtcctttgtgccggccagctttgtcgtgttcctgattcaggagcgg
gtcagcaaagcaaagcacctgcagttcatcagtggagtgaagccggtcatctactggctc
tccaattttgtctgggatatgtgcaactatgtggtccctgccacgctggtcattatcatc
ttcatctgtttccagcagaagtcctacgtgtcctccaccaacctgcctgtgctagccctt
ctacttttgctgtatgggtggtcgatcacacctctcatgtacccagcctccttcgtgttc
aagatacctagcacagcctatgtggtcctcaccagcgtaaacctcttcattgggatcaat
ggcagtgttgccacttttgtactggagctcttcaccaacaataaactgagtaacatcaac
gacatcctgaagtctgtgttcttgatcttccctcatttttgcctagggcgggggctcatt
gacatggtgaaaaaccaggcaatggctgatgccctggaaaggtttggggagaaccgcttt
gtctcaccactttcttgggacttagtgggacggaacctcttcgccatggctgtggaaggg
gtggtgttcttcctcattactgttctgatccagtacagattcttcatcaggcccagacct
gtaaatgcaaagcttcctcctctgaatgatgaggatgaagatgtgaggcgggaaagacag
aggattcttgatggtggaggacagaatgacatcttggaaatcaaagaattgactaagatc
tatagaaggaagaggaagcctgcagttgacaggatctgcattggcattccccctggcgag
tgctttggacttctgggagttaacggggctgggaaatcatcaactttcaagatgttaact
ggagataccactgttaccagaggagatgcttttcttaacaaaaatagtatcttatcaaac
atccatgaagtacatcagaacatgggctattgccctcagtttgatgccatcacggagcta
ctgactgggagagaacatgtggagttctttgctctcttgagaggagtcccagagaaggaa
gttggcaaggttggtgaatgggcaattcggaaactgggccttctgaaatacggagaaaaa
tatgctggtaactacagtggaggcaacaagcgcaagctctccacagccatggctttgatc
ggtgggcctcctgtggtgtttctggatgaacccaccacaggcatggatcccaaagcccgg
agatttttgtggaattgtgccctaagtattgtcaaggaggggagatcagtagtgcttaca
tctcatagtatggaagaatgtgaagctctttgtactaggatggcaattatggtcaatggg
aaattcaggtgtcttggcagtgttcagcatctgaaaaacaggtttggagatggatataca
atcgttgtacgaatagcagggtcaaaccctgacctgaaacctgtccaggaattctttgga
ctcgcctttccaggaagtgtccttaaagagaaacatcgaaatatgctgcaataccagctt
ccatcttcattatcttctctggccaggatattcagcatcctttcccagagcagaaagcaa
ctccatatagaagactactctgtttctcagacgacacttgaccaagtatttgtgaacttt
gccaaggaccaaagtgatgatgaccacttaaaggacctgtcattacacaaaaaccagaca
gtagtggatgttgcagttcttacgtcttttctgcaggatgagaaagtcaaagaaagttat
gtatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (6)   
   Pfam (6)   
All databases (49)   

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