KEGG   Loxodonta africana (African savanna elephant): 100675596
Entry
100675596         CDS       T04351                                 
Symbol
POLR1B
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA2
  KO
K03002  DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100675596 (POLR1B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lav03021]
    100675596 (POLR1B)
Enzymes [BR:lav01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     100675596 (POLR1B)
Transcription machinery [BR:lav03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     100675596 (POLR1B)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpa2_4 RNA_pol_Rpb2_2
Other DBs
NCBI-GeneID: 100675596
NCBI-ProteinID: XP_003417447
Position
Unknown
AA seq 1135 aa
MEPSGRWQNLPSGASLKHLTDPAYAIRGEQKXPALQELPRARLSPSNFAVREGLSHAVQA
IPPFEFAFKDERISLTIVDAVISSPTVPKGSICKELKVYPAECRGRRSTYRGKLTADISW
AVNGISKGIIKQFLGYVPIMVKSKVCNLHSLPPKALIEHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPIAMIRPKWKSRGLGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIY
RKELFFLPLGFALKALVSFSDYQIFQELIRGKEDDSFFRNSVSQMLRIVTEEGCSTQKQV
LNYLGECFRVKLNLPEWYPNEQAAEFLFDQCICIHLNSNTEKFYVLCLMTRKLFALAKGE
CMEENPDSLMNQEVLTPGQLFLMFLKEKMEAWLVSIKIAIDKKAQKINLSINTENLMKIF
NMGTDLTRPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGADFAK
MRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTTSIPALLCNLGVT
PVDGAPHRPHSECYPVLLDGVMVGWVEKDLAPGIAESLRRFKVLREKRIPPWMEVALIPM
TGKPNLYPGLFLFTTPCRLVRPVQNLELGKEELIGTMEQVFMNIAIFEDEVFAGVTTHQE
LFPHSLLSVIASFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSP
LVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFID
LSEKIKQGDDSLVFGVKPGDPRILQKLDDDGLPFIGAQLQYGDPYYSYLNLNTGENFVVY
YKSKENCVVDNIKVCSNDTGSGKFKCVCITMRVPRNPTIGDKFASRHGQKGILSRLWPVE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEENSALE
YFGEMLKAAGYNFYGTERLYSGISGLELKADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPVGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPL
LEKPPPSWSAMRNRKYNCTLCNRSDTIDTVSVPYVFRYFVAELAAMNIRVKLDVV
NT seq 3408 nt   +upstreamnt  +downstreamnt
atggagcctagcggccggtggcagaacctgcctagcggggctagcctaaagcacctgacc
gaccccgcttacgcgatccgcggggaacagaaatagccagcgttgcaggagctgccgcgg
gccaggttgagtccttccaacttcgcggtgcgagaaggactcagccacgcagtgcaggct
atacctccctttgaatttgcttttaaagatgagcgtatctctcttaccattgtggatgct
gtcatcagttcacccacagttcctaaagggagcatctgcaaggagctcaaagtttaccca
gcagaatgccggggccggagaagtacctaccggggaaagctgacagctgatatcagctgg
gcagtgaatggaatctcaaaaggaatcattaaacagtttcttggttatgtgcctatcatg
gtgaagtccaaggtttgcaacttacacagccttcctccgaaagccctgattgagcaccat
gaggaagcagaggaaatgggaggctattttataatcaatggcattgaaaaagtcatccga
atgttgattatgcctcggagaaatttccccatcgcaatgataagaccaaaatggaaaagt
agagggcttggctatactcagtatggagtttcaatgcactgtgtcagggaagaacattcc
gctgtcaacatgaaccttcactacttggaaaatggtactgttatgttgaactttatttac
cggaaagagctgtttttccttcctttgggatttgcacttaaggcgcttgtcagtttttcc
gattatcagatttttcaggagctcatcagaggaaaagaagatgactctttctttaggaac
tctgtttctcagatgttaaggattgtaacagaagaaggttgttccacacaaaaacaggtc
cttaactatctaggtgaatgcttcagagtaaagctcaatcttccggagtggtatcccaat
gaacaagcggcggagtttctgtttgaccagtgcatctgtatccacttaaattccaatact
gagaagttttatgtgctttgtctcatgacccggaaactctttgctttagccaaaggagag
tgcatggaggagaatcctgatagtttaatgaatcaagaagtccttacacccggtcagctc
ttccttatgtttctgaaggaaaaaatggaagcttggttagtgtctattaaaatagctata
gacaagaaggctcagaagatcaatttatccataaacactgaaaatttgatgaagattttt
aatatgggaacagaccttacgagaccctttgagtatcttcttgctactgggaatctacgt
tctaaaacaggtcttggcttcctgcaagattctggactgtgcgttgtggctgacaagctg
aacttcatacgctacctttcccatttccgctgtgtgcacagaggggctgattttgccaag
atgaggaccaccacagtacgcaggctgcttccagagtcctggggtttcctctgtcctgtg
cacaccccagacggggagccctgtggtctgatgaaccacttaactgctgtgtgtgaggtt
gtcactcagtttgtatatacaacgtctattccagcattgctctgcaatttgggggtcact
ccagttgatggagctccacatcgaccgcacagtgagtgctaccctgtcctgttggatggt
gtcatggtcggctgggtggagaaggaccttgctcctggcattgcagagtcactccggcgt
tttaaggtgctgagagaaaaaagaattcctccgtggatggaggtggccctcatacccatg
acaggaaaacccaatctgtacccagggctattcctttttaccaccccttgtagactggta
cggcctgttcagaacttggaattaggcaaagaagaactgatcggaactatggaacaggtc
ttcatgaacattgctatctttgaggatgaggtttttgctggagttaccacacaccaggag
cttttccctcacagcctgctgagtgtgattgccagcttcatccctttctctgatcacaac
cagagtccacggaacatgtaccagtgccagatgggtaagcaaactatgggctttccactt
cttacttatcaggaccggtcagataataaactgtatcgtcttcagactcctcagagtcct
ttagtgaggccgtacatgtatgattattatgacatggataactatccaatcgggacaaat
gccatcgttgctgttatttcttacaccggctatgacatggaagatgccatgattgtgaat
aaggcctcttgggaacgaggcttcgcccatggaagtgtgtacaagtctgagttcatagat
ctctctgaaaaaattaaacaaggagatgatagtctggtgtttggagtcaaaccgggtgat
ccacggattttgcagaaattagatgatgatggattgccatttattggagcacagttgcag
tatggagacccatattacagctacctgaacctcaatactggggaaaactttgtggtctac
tataagagtaaagaaaattgtgttgtagataacatcaaagtgtgtagtaacgatactgga
agtggaaagttcaagtgtgtgtgcatcaccatgagagtccctcggaatccgaccatcgga
gacaaattcgccagccgacatgggcagaagggcattttgagcaggttgtggccagttgag
gacatgccctttactgagagtgggatggtcccagacattctcttcaatcctcatggtttt
ccatcccgcatgaccattggcatgttaatcgagagcatggcagggaagtccgcagcgttg
cacggtctctgtcatgatgctacacccttcatcttttcagaggagaactctgccttagaa
tactttggtgagatgttgaaggctgctggctacaacttctatggcaccgagagactgtat
agtggcatcagtgggctagaactgaaagcagacattttcataggtgtggtttattatcaa
cgcctacgccacatggtctccgacaagtttcaggttagaaccacaggagccagagacaaa
gtcaccaaccaacctgtcgggggaagaaatgtgcagggtggaatccgttttggggagatg
gaacgagatgctcttttagctcacggtacatcttttctgcttcatgaccgcctcttcaac
tgttctgaccgttcagtagcccacgtgtgcgtaaagtgtggtagtttactctctccgctg
ctggagaagccacccccttcgtggtctgccatgcgcaacagaaaatacaactgtactctt
tgtaaccgcagtgacactatcgacaccgtttctgtgccttacgtttttcggtattttgta
gctgaactggcagcaatgaacatcagagtgaaactggatgttgtttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (27)   

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