KEGG T01954: LAB52

Lactobacillus amylovorus GRL1118: LAB52_05865

Entry

LAB52_05865       CDS       T01954

Name

(GenBank) pseudouridine synthase

K06180

23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]

Organism

lay Lactobacillus amylovorus GRL1118

Brite

KEGG Orthology (KO) [BR:lay00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lay03009]
    LAB52_05865
Enzymes [BR:lay01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     LAB52_05865
Ribosome biogenesis [BR:lay03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    LAB52_05865

SSDB

Motif

Pfam:

PseudoU_synth_2 S4

Other DBs

NCBI-ProteinID:

AEA32110

Position

complement(1147851..1148759)

AA seq 302 aa
MPKKYLLEVKDEHGRLDKFVSEQIPDLSRTRVKELIQDDNILVNQKKEKVSYKVQAGDQI
EVNVPAVKPLDVVPEDIPLDIVYEDDDVIVVNKPQGMVVHPAPGHSDHTLVNALLYHTKD
LAKSPEGFRPGIVHRIDKDTSGLLMIAKNAKARESLEDQLAHKTNKRIYWAIVHGNFSEE
NGTIDAPIGRNPYDRKKMAVVERGKKAITHFKVLKQFKGYSLIECQLETGRTHQIRVHLD
YIGHAVAGDPLYGPRKTLKGNGQFLHAKVLGFKHPRTGKWMEFSVEPPQIFQETLAQLEK
NK

NT seq 909 nt +upstreamnt +downstreamnt
atgcctaaaaaatatctacttgaagtaaaagatgaacatggtcgtttagataaatttgtt
tcagaacagataccagatttatcaagaaccagagttaaagaattgattcaagatgacaat
atcctagtcaaccaaaagaaggagaaagtttcctataaggtacaagcaggggatcaaatt
gaagttaatgttccagcggtaaaaccattggatgttgttcccgaagatatcccacttgat
attgtttatgaagatgacgatgtgattgtggttaataaacctcagggcatggtagtgcat
cccgcaccaggtcattcagatcatacattggttaatgcacttttgtatcatacaaaagat
ttagcgaagtctcctgaagggtttagacctggaattgtccatagaatcgataaagatact
tctggtcttttgatgattgctaaaaatgccaaggctcgtgaatcattagaggatcaatta
gcccataaaactaacaaacgaatttattgggcaattgttcatggcaattttagtgaagaa
aatgggaccattgatgcaccaattggtcgtaatccatatgatcgtaagaagatggccgtt
gttgaaagaggtaagaaggcaattacccactttaaggttttaaagcagtttaaaggatat
agtttaatcgaatgtcaacttgagacaggacgtactcatcaaattagagtgcatcttgac
tatattggtcacgcagtggcaggtgatccattatatggaccaagaaaaacgttaaaaggt
aacggtcaatttttacatgccaaagttttaggctttaaacatcctagaactggtaaatgg
atggaattttctgtcgaaccacctcagatttttcaagaaacattagctcaattagaaaaa
aacaagtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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