KEGG   Lelliottia amnigena: A8A57_00585
Entry
A8A57_00585       CDS       T04400                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
laz  Lelliottia amnigena
Pathway
laz03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:laz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    A8A57_00585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:laz03021]
    A8A57_00585
   03400 DNA repair and recombination proteins [BR:laz03400]
    A8A57_00585
Enzymes [BR:laz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     A8A57_00585
Transcription machinery [BR:laz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     A8A57_00585
DNA repair and recombination proteins [BR:laz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      A8A57_00585
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: ANG90966
Position
complement(126428..126703)
AA seq 91 aa
MARVTVQDAVEKIGNRFDLVLVAARRARQMQSGGKDPLVPEENDKTTVIALREIEEGLIN
SQILDVRERQEQQEQEAAELQAVTAIAEGRR
NT seq 276 nt   +upstreamnt  +downstreamnt
atggcacgcgtaactgttcaggacgctgtagagaaaattggtaaccgttttgacctggta
ctggtcgccgcgcgtcgcgctcgtcagatgcagtccggtggtaaagatccgctggtacca
gaagaaaacgataaaaccaccgttattgcgctgcgtgaaatcgaagaaggtctgatcaac
agccagatcctcgacgtacgtgagcgccaggagcagcaagagcaggaagccgcagaactg
caggccgtcaccgccattgctgaaggtcgtcgttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system