KEGG T00712: LBF

Leptospira biflexa serovar Patoc Patoc 1 (Ames): LBF_0167

Entry

LBF_0167          CDS       T00712

Symbol

rnd

Name

(GenBank) Ribonuclease III

K03684

ribonuclease D [EC:3.1.13.5]

Organism

lbf Leptospira biflexa serovar Patoc Patoc 1 (Ames)

Brite

KEGG Orthology (KO) [BR:lbf00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lbf03016]
    LBF_0167 (rnd)
Enzymes [BR:lbf01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     LBF_0167 (rnd)
Transfer RNA biogenesis [BR:lbf03016]
Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    LBF_0167 (rnd)

SSDB

Motif

Pfam:

DNA_pol_A_exo1 HRDC

Other DBs

NCBI-ProteinID:

ABZ92713

Position

I:complement(170889..172109)

AA seq 406 aa
MQINSNYILVDTAKALDLALINLRQSKIMSIDTESSGYYTYYPKVCLIQINSNGKNYLID
PLKITNLSALGPLFEDPNILKIFHSAQDDIKALKRDFGFKFVNTADTMISSRLLSLEQSS
LSFVVEHYHKVTLSKVEQKSNWEIRPLQKQQLKYAALDTAYLESIWLKMEEDLKRRSLYD
EAKSEFDFIASEDYVAKEGEGFSLGKFPDILNFTPLERRKILELLRYRDEKAKRINKASF
RVFNNDRLSQSVKEQPNEEKCIEWFGKKDGTEIYKLLIAEYNDPIDTSELSKRHGEDLNE
DENHKFQNAKKWRLRIMRARRMEHSLLPSNKQLITVLRAAPKNLEELKALNVFSDWKVQN
YGPSLLAAIQGLPFDSMINRLVAIRSKEAFVAKRRKKQNQNSKDEG

NT seq 1221 nt +upstreamnt +downstreamnt
atgcaaatcaattccaactatattctcgtcgatacagcaaaagctttggatttggccctg
atcaatctaaggcagtccaaaatcatgtcgattgacacagagtcttcgggttattacaca
tattatcccaaagtttgtctcattcagatcaattccaatggcaaaaactacctcatagac
ccgctaaaaatcacaaatttgtcagctttgggtcctttgtttgaagatcccaatattctg
aaaatcttccattccgcacaagatgacatcaaagccctcaaacgtgactttgggttcaaa
tttgtgaacacggcggatacgatgatcagctctcgattattgtctttggaacaaagttcg
ttgtcatttgttgtggaacactaccacaaggtaaccctttccaaagtggaacaaaagtcc
aattgggaaattcgccctctgcaaaaacaacaactcaagtatgccgccctcgacacagcc
tatttagaatccatttggttaaaaatggaagaagatctcaaacgcaggtctttgtatgat
gaagccaagtctgaatttgatttcattgcttcggaagattacgtagccaaggaaggggaa
ggattttcccttggaaaatttcctgacattctcaatttcacccctctcgaacgtcgaaaa
attttagaactacttcgttaccgagatgaaaaagcaaaacgaatcaacaaagcaagtttt
cgcgtctttaataatgacagattatctcaatcagtcaaagaacaaccaaacgaagaaaaa
tgtattgaatggtttggaaaaaaagatggtactgagatttataaattactcattgcggaa
tacaatgatcctattgatacttcggaactctccaaacgacatggggaagatttaaacgaa
gatgaaaatcataaattccaaaacgctaaaaaatggcgtcttcgcattatgcgtgctaga
cgaatggaacattctcttttaccatccaataaacaactcatcactgttttaagagcagct
cctaaaaacttagaagaattaaaagccctgaatgtattctctgattggaaagtacaaaac
tatggtccaagtttacttgctgccatccaaggactcccttttgattcgatgatcaaccga
ttggttgccatccgttccaaagaagcatttgtagccaaacgtaggaaaaaacaaaaccaa
aactcgaaagacgagggttga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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