KEGG T02244: LBUCD034

Lentilactobacillus buchneri subsp. silagei CD034: LBUCD034_0005

Entry

LBUCD034_0005     CDS       T02244

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

lbn Lentilactobacillus buchneri subsp. silagei CD034

Brite

KEGG Orthology (KO) [BR:lbn00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lbn03032]
    LBUCD034_0005 (gyrB)
   03400 DNA repair and recombination proteins [BR:lbn03400]
    LBUCD034_0005 (gyrB)
Enzymes [BR:lbn01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     LBUCD034_0005 (gyrB)
DNA replication proteins [BR:lbn03032]
Prokaryotic type
  DNA Topoisomerases
   LBUCD034_0005 (gyrB)
DNA repair and recombination proteins [BR:lbn03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      LBUCD034_0005 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 GyrB_hook

Other DBs

NCBI-ProteinID:

AFR99119

UniProt:

J9W261

Position

4606..6549

AA seq 647 aa
MADEKETKKELAHEYDASQIQVLEGLEAVRKRPGMYIGTTSSQGLHHLVWEIVDNGIDEA
LAGFATKITVTVEKDNSITVTDDGRGIPVDIQKKTGKPALETVFTILHAGGKFGGGGYKV
SGGLHGVGASVVNALSSELDVEVTRDGKVYYMDFSRGHVKTKMKVVREVSDDLHGTKVHF
LPDPDIFRETTTYDIKVLTARLRELAFLNKGLRIVVRDLRPEKPTEQDFMYEGGIKHYVE
YLDNSKETLLDEPIYVEGVMNGITVEVAIQYTNDYHNTLMTFTNNIHTYEGGTHEEGFKR
ALTRVINDYARKNKLLKDNEPNLSGEDVREGTTAVVSIKHPDPQFEGQTKTKLGNSDART
VTDRIFSDHFTKFLMENPKMARKIVDRGMLASKARSAAKRAREVTRKKSGLEISNLPGKL
ADNTSKDPKISELFIVEGDSAGGSAKQGRSRLTQAILPIRGKILNVEKASMDRILANEEI
RSLFTAMGTGFGEDFDLSKINYHKLIIMTDADVDGAHIQTLLLTLIYRYMRPLIDAGFVY
VAQPPLYQVRQGKMSRYIDSDDDLNAFLGTLQPSPKPVIQRYKGLGEMDAEQLWDTTMNP
ENRHLLRVESSDAAEADKVFSMLMGDKVEPRREFIEDNATFVENLDV

NT seq 1944 nt +upstreamnt +downstreamnt
atggccgacgaaaaagaaaccaaaaaagaattagcgcatgaatatgatgccagccaaatt
caagttcttgaaggactggaagccgttcgaaaacgtcccgggatgtacattggaacaacc
agttcacaaggacttcatcatttggtctgggaaattgttgataatgggattgatgaagcg
cttgctggatttgccaccaaaattaccgttaccgttgaaaaagacaacagcatcaccgtt
actgatgacggtcgtggaattccagttgatattcaaaaaaagacgggcaagcctgctcta
gaaaccgttttcacgattcttcatgccggtggtaaatttggcggcggcggatacaaagtt
tctggtggtctgcatggtgtgggtgcttcagttgttaacgccctgtcctctgaactggac
gttgaagttacccgtgacggcaaagtttactacatggacttcagtcgtggtcacgtcaag
accaagatgaaagtcgtccgtgaagtttcggatgatctccatggtactaaggttcatttc
ctgccggatcctgatatcttccgggagaccactacttatgatattaaagtcttaacagcc
cgactacgcgagttggcatttttgaacaagggattacggattgttgttcgtgacctgcgt
ccggaaaagccgaccgaacaagactttatgtatgaaggcgggatcaaacattacgttgaa
tacttggataacagtaaagaaaccttgttggatgaaccaatttacgttgaaggtgtcatg
aacggaattaccgttgaagtggcgattcaatatactaacgattatcacaatacattaatg
accttcactaataatattcatacctatgaaggcgggactcacgaagaaggctttaagcga
gccttgactcgcgtcattaacgattatgcccgcaagaacaagctgttaaaagacaacgaa
ccaaacctttccggtgaagatgtccgtgaaggcacgacggctgttgtcagcatcaagcat
ccagacccacagtttgagggccagacgaagaccaagctggggaattcagatgctcgaacg
gtgactgaccgcattttcagtgatcatttcaccaagttcttgatggaaaatccaaaaatg
gccagaaaaattgttgatcgtgggatgctggcctcaaaagctcgttcggcagctaaacgc
gcccgtgaagttacccggaaaaagagtggcttggaaatcagcaacctgcctggtaagtta
gccgataacaccagtaaggatcctaaaatttctgaactgtttatcgtcgagggtgattca
gccggcggatcagctaagcagggtcgatcacgtctgacccaggcaattctgccaattcgt
ggaaaaatattaaacgttgaaaaagcaagtatggaccgaattttagccaacgaagaaatt
cgttcattatttactgccatgggaaccgggtttggtgaggactttgatttatcaaagatt
aattaccataagctgatcatcatgaccgatgccgatgttgatggtgcccatattcaaacg
ctgttgttaacgttgatttaccgttacatgcggccattaattgatgccggttttgtctac
gttgcccagccaccgttgtatcaagtccgtcaagggaagatgtcacgttacattgattcc
gatgatgatttgaatgcattcttaggaaccctgcagccatcaccaaaacccgtgattcaa
cgatacaaaggtttaggagaaatggacgctgaacaattatgggacaccacaatgaatccc
gaaaaccgtcatctgttgagagttgaatcctccgatgcagccgaagcagataaggtcttc
tcgatgttaatgggcgacaaggtggaaccacgacgcgagtttattgaagacaacgcaacg
tttgtggaaaatcttgatgtttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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