KEGG   Lentilactobacillus buchneri subsp. silagei CD034: LBUCD034_1897
Entry
LBUCD034_1897     CDS       T02244                                 
Symbol
uvrD
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
lbn  Lentilactobacillus buchneri subsp. silagei CD034
Pathway
lbn03420  Nucleotide excision repair
lbn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lbn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LBUCD034_1897 (uvrD)
   03430 Mismatch repair
    LBUCD034_1897 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lbn03400]
    LBUCD034_1897 (uvrD)
Enzymes [BR:lbn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LBUCD034_1897 (uvrD)
DNA repair and recombination proteins [BR:lbn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LBUCD034_1897 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     LBUCD034_1897 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C_2 AAA_19 UvrD_C SLFN-g3_helicase DUF1959 Viral_helicase1 AAA_16 DEAD AAA_30 NACHT
Other DBs
NCBI-ProteinID: AFS00888
UniProt: J9W360
Position
complement(1871178..1873472)
AA seq 764 aa
MADNIKTQEQHHLDHVIDEIHISQKDLEQKIKATKRDVKDINRNFNNDVRLKTETYSGMM
ETAMSIRQQQQMLSERENRQEHAARELGTLNKLEQNPYFARIDFREGDEKRDETIYIGMA
SFTDRPDHYLIYDWRAPISSIYYNGGIGNVSYMTPDGEQTVDVKLKRQFQIENSKIKTVF
DTEEVVGDQMLLDALSNRSDTKMKSIVTTIQKEQNQIIRDTDSDLLFVQGSAGSGKTAAV
LQRVAFLLYQYRGNLHSGQIILFSPNQLFNDYINQVLPELGEQNMVQMTFYQYSSHRLPS
VQVETLSERFTEQLDKTAQKLTDVKGSLDYFRAVSAYANHLNKEDMRFRNLMFNGEILIP
KEKIAEIYYGFNENYNLRNRLESTKEELMKILNRKIHVEMRKKWVEDAVQNLSKEEIQQF
HAEGEEEILNADKEFKFLARRIVIKSFRKVQRQISRNHWLSINNQFVHMLKEMPKILNLA
DFGISNELWAEEIKATVGRLKKGRLSLADASSYIYLYDLMTGKRGDKDIRYLFIDEVQDY
SAFQLAFLKFSFPRARFTLLGDLNQAIFTHENSRKLLGELGSMFPEDKTRVVQLTKSYRS
TEQITNFTKHLLTNGENIIPFNRQGDLPHIYVKDGVDAAVEQVKQQSELNLADHETTAII
GKTLKECQELSGKLAELGVKSTLIRTENQRLVKGIIVVPSYLAKGLEFDSVIMWDASTAC
YPDESDRQLVYTICTRAMHRLTVVAVKSLSPIFETVPQDEYELN
NT seq 2295 nt   +upstreamnt  +downstreamnt
atggcagataatatcaaaacacaagaacaacaccatttggaccacgtcattgatgaaatc
catatttcccaaaaggaccttgagcaaaagattaaggcaaccaagcgggatgttaaagat
atcaaccgcaatttcaacaatgacgttcggctcaaaactgagacgtacagcgggatgatg
gaaactgccatgtccattcggcagcaacagcaaatgctttctgaacgtgaaaatcgccag
gaacatgccgcccgagaacttgggacgctcaacaagcttgagcagaacccctatttcgca
cggattgactttcgtgaaggggacgaaaaacgagacgagaccatctatattggcatggca
tcgtttaccgaccggcctgaccactacctgatctatgactggcgggcaccgatttctagc
atttactataacggtggaatcggcaatgtcagttacatgacgcccgacggtgaacagacc
gttgatgtcaaattaaagcgccaattccaaattgaaaattcgaagatcaagacggtgttt
gataccgaagaagtcgtgggtgaccagatgcttctggatgccttgagcaatcgttcagac
accaagatgaagagtatcgtgaccaccattcaaaaagaacagaaccagattattcgggat
accgattctgatttactgtttgtccaaggctcagctggttccggaaagacggccgccgtt
ctgcagcgggtggcctttctcctgtaccaataccgcgggaatctccattccggccaaatt
attttattttcaccaaaccaactgtttaatgactatattaaccaggtgctccctgaactg
ggcgagcagaacatggttcagatgacgttctatcagtacagctcacaccgtttgccgagt
gttcaagttgagaccctgtctgagcgcttcactgagcaactggacaagactgcccagaag
ctgactgacgtcaaaggcagcttggattatttccgagcagtcagtgcttacgccaaccat
ttgaacaaggaagacatgcgctttagaaacctgatgtttaacggcgaaatcctgattcca
aaagaaaaaatcgccgaaatctattatggtttcaatgagaactacaacctccgcaaccga
ctggagtcaaccaaggaagaattgatgaagattcttaaccgcaagattcacgtcgaaatg
cggaaaaagtgggttgaagatgcggttcaaaacctatctaaagaagaaattcaacagttc
catgccgaaggtgaagaagaaattctcaatgccgataaggaattcaagttcctggcccga
cggattgttatcaagtcatttcgaaaagtccagcggcaaatttctcgcaaccactggttg
agtatcaataaccagtttgttcatatgcttaaagagatgccaaagatcctcaatctggct
gattttggcatttctaacgagttgtgggccgaagagatcaaagccaccgtcggccgtttg
aagaagggcagattgtcgttagctgatgcgtcatcgtacatttacttgtatgacttgatg
actggtaaacgcggcgataaagatattcgttatctctttattgatgaggtgcaggattat
tcagcctttcaattggcattcttgaaattcagtttcccaagggcacgattcacgctgctg
ggtgatttgaaccaggcgattttcacccatgaaaacagccgtaaattgttgggcgaactt
ggcagcatgttccccgaggataagacccgcgtggttcaattgaccaagtcgtaccgatca
acagaacagattaccaactttaccaagcacctgttgaccaatggtgagaatatcattcca
ttcaaccgtcaaggcgacctgccgcacatttacgtcaaggacggggtcgatgctgcagtt
gagcaggttaaacagcagtccgagttgaacttggccgaccatgaaacaacggccatcatt
ggcaagacactgaaagaatgtcaagagctaagcggcaaactcgctgaactgggtgtcaag
tcaacattgattcgaactgaaaatcagcgtttggtgaagggcatcattgtcgtgccttca
taccttgccaaagggttggaattcgacagtgtgattatgtgggatgcttcgacggcctgc
tacccggacgagagtgatcgccaactggtctacacgatttgtacccgggcaatgcatcga
ttgacggttgtggcagtcaaatcgttgtcaccaatttttgagacggtgcctcaagatgaa
tatgaattgaattaa

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